| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1928 |
|---|
| Symbol | |
|---|
| ID | 3367438 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | + |
|---|
| Start bp | 2200825 |
|---|
| End bp | 2201748 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 637652274 |
|---|
| Product | regulatory protein, LysR:LysR, substrate-binding |
|---|
| Protein accession | YP_235010 |
|---|
| Protein GI | 66045169 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0142597 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTCGAA TCTTTGATGT TGATACGCAC CTTTGGCGCA CGTTCAAATC GGTGAGCGAA
ACTCGAAGTA TCACGCGGTC TGCGGTTGCG CTGTGCAAAA CTCCACCAGC CATCAGCATG
CAGATAAAAA AGCTGGAAGC ACTTCTGGAA CTGAAGTTGT TCGTCAGAGG CGACGACGGT
TTTCGGCTGA CGGTCATTGG CGAAGAAGTA TTGGCGGCCG CTGAGAAGAT TCTCGCCATG
CATGACAATC TGTTCCGCCT GAAGAACAAG AACCCTGATA GCGAATTGCG TCTGGGCATG
CCGGATGATT ACGCACTCTT TTTCCTGCAA GGGATTGTAA AAGCCCTGGC TCGATCAAAC
CCCGATCTCA AGATAAAGCT GGTCTGCAAG ACGTCGTCGT TCTTGATAGA CGACGTCGAC
CAGGGTCGAC TGGACATGGC CGTTGTCGCA GTGCCGGAAT CTCGGGTCAT GGAGCATTCT
GAATACATCA GGCGTGAAGA ACTGCACTGG ATCGGCGATG CCAGGCTGGT CAGGGCAGGG
CATCCGATAC CGTTGGTGCA TTTTCCCGAT GGATGCATAT GCCGAGAGGT CTCTGTCCAA
TCCTTGCAGT TTGCCGGGAT GGCGTCCGAG ATACGATTCA CCTCAGAGTC CAATTTTGCC
GTTTTCAATG CCATCAGTGC CGGTGTAGGT ATCGGCGTGG GCGAGTTATC ACTCATTCCG
GGCGATACGC CTATTATCAC AAGCTCGCTG CTTCCCGCAT TGCCCGCGAT ACGGATGTCT
GTACTCTCCA ACGACGATCG CATTTCCAGA GCTGTCCTTT CCAGAATAAG CACCAGCGTT
GTGAGGAGCG TCAATGCTGT CTGCGAGCAG AATATCCTCG GAAAAAAACG CCCGGAAAAT
GCCTTTGCCG TTGGCGCTTT TTGA
|
|---|
| Protein sequence | MSRIFDVDTH LWRTFKSVSE TRSITRSAVA LCKTPPAISM QIKKLEALLE LKLFVRGDDG
FRLTVIGEEV LAAAEKILAM HDNLFRLKNK NPDSELRLGM PDDYALFFLQ GIVKALARSN
PDLKIKLVCK TSSFLIDDVD QGRLDMAVVA VPESRVMEHS EYIRREELHW IGDARLVRAG
HPIPLVHFPD GCICREVSVQ SLQFAGMASE IRFTSESNFA VFNAISAGVG IGVGELSLIP
GDTPIITSSL LPALPAIRMS VLSNDDRISR AVLSRISTSV VRSVNAVCEQ NILGKKRPEN
AFAVGAF
|
|---|
| |