Gene Psyr_1927 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1927 
Symbol 
ID3367437 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2200095 
End bp2200541 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content54% 
IMG OID637652273 
Producthypothetical protein 
Protein accessionYP_235009 
Protein GI66045168 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3435] Gentisate 1,2-dioxygenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0136451 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAACC ATACTTTTTC TTCCGGTGAT TTCGTGCATG TTCCCGCCAG TCTGGCCGTT 
GGCGAGGACG TGGGCACGCT GTTACATGAA GGGGTCAGAA CAACCACGCT GGACGCGTTC
AGCAAAACAA GAAAGCACGA AGTTCATGTT GTCGACCTGC CGTCCAGGTC GATAAGTATG
ACCTTCGGTG CGCTGCAGCC GCTGCAAGGG TCGGGCCTGC ATCGGCATAA CTATGAAACC
ATCATCTATA TCATTTCAGG CACCGGTTTT TCGATGGTAG GAGAGACGCT CGTTGCCTGG
ACAGCTGGAG ACGCCGTTTA TATTCCCGTC TGGCGTTGGC ACAAACACGT CAATACATCA
GAGGACGCAG AGGTCACGTA CATCGCCTGT GAAAATACAC CTCTGCTGCA GGCGCTTGGC
GTCGCGTTGC GGGAGGAAGC TTCCTGA
 
Protein sequence
MNNHTFSSGD FVHVPASLAV GEDVGTLLHE GVRTTTLDAF SKTRKHEVHV VDLPSRSISM 
TFGALQPLQG SGLHRHNYET IIYIISGTGF SMVGETLVAW TAGDAVYIPV WRWHKHVNTS
EDAEVTYIAC ENTPLLQALG VALREEAS