Gene Psyr_1922 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1922 
Symbol 
ID3367432 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp2195237 
End bp2196166 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content54% 
IMG OID637652268 
ProductUBA/THIF-type NAD/FAD binding fold 
Protein accessionYP_235004 
Protein GI66045163 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0476] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.459243 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0162799 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGAAGA AAGCACGCAT TGTTAAATTT CCAGGCGTTT TCGACGAGCG GGTATACAAC 
GAGCGGGTTT CACGCAGCGG TTGTTTTCTC GGCAACTCGA AACTGGAGCA GATGGCCAAT
CAGGGTAAGC TTTCCAATGC TGTTGTCGGC GTCGCAGGCG CAGGGGGTAT TGGCGGTGCC
GTGGCCCTCG GGCTGGCACG GTTGGGTGTA AGGCATATCA AAATTGCCGA TCCCGATTCT
TTCGAAATCA GCAATATCAA CCGACAGTTT GGTGCTTCAG TGGAAACCGT CGGTCGTAAC
AAGGCGTTGG TGGTTGCCGA GCTGGTTCAC CGTTTGGCGG GGGACGTGAG CGTTGATGTG
TTTCCGGAGG GTATACAGAA GCACACCGCT GAAGCGTTTG TGGAGGACTG TGATCTGGTG
TTGGATCAAA TGGACTTCTA CAGCATTGGC GAGCGCTATG CACTGCACAG GGCGTACCGT
AACTCAGCCA GGTGCAAAGG CTTGCTGGCA TCCTCGGTGG TCGGTTGGGG CGCGAACATC
TACAAGTTCG ACAAGGCAGG CCTGACGCTG GAGGATTTTT ACGATATTCC GGAAGAGGCG
CAGATGACAC CTGAACTGGT CGAAAGGCTG GTCATGCTCC AGGCCTCTTA TCAGCCTCGT
TTTCCGAGCA TTCCCGATAT TTTCAGCTGG ATGAAAGAGA CAGGAAACGT GCCTATTCTT
TCCGTGGCAC CGACGGCTTC GCATTACCTG ATTCTCTGTC GTTCAGCGCT GATGCTTTGC
GACCTGGAGG GCGCACCGTA CAGCACCGAA CTTCCTCCCA TGCCCAAGTA TTACTGGTTC
GACGGCTCTA CGTTCGACAA CGGTATTTAT GAATTCGACG GCACGTGGGC AAACCCCGAG
GAGCATCGCA AGCACTTCAA TGTCAATTGA
 
Protein sequence
MLKKARIVKF PGVFDERVYN ERVSRSGCFL GNSKLEQMAN QGKLSNAVVG VAGAGGIGGA 
VALGLARLGV RHIKIADPDS FEISNINRQF GASVETVGRN KALVVAELVH RLAGDVSVDV
FPEGIQKHTA EAFVEDCDLV LDQMDFYSIG ERYALHRAYR NSARCKGLLA SSVVGWGANI
YKFDKAGLTL EDFYDIPEEA QMTPELVERL VMLQASYQPR FPSIPDIFSW MKETGNVPIL
SVAPTASHYL ILCRSALMLC DLEGAPYSTE LPPMPKYYWF DGSTFDNGIY EFDGTWANPE
EHRKHFNVN