Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_1558 |
Symbol | |
ID | 3367058 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 1753199 |
End bp | 1754128 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637651899 |
Product | regulatory protein, LysR:LysR, substrate-binding |
Protein accession | YP_234644 |
Protein GI | 66044803 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.525706 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00043239 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTTTTCGT CTGAGCGACT CAAGGGTATC GATGTGTTCG TCATAGTCGC CGACATGGGC AGCTTCACGG CCGCAGCTGA ACGGTTGAAC CTGACCAACT CGGCGATCAG CAAGAGCATT GCGCGATTGG AAGGGCGTCT GCGCACCCGG TTGTTCCAGC GCACTACGCG TCGGCTGTCG CTCACCGAGG CAGGGGAAAC CTTCTACCGT ACCTGCACAA CGGTCCTTTC GGATCTGGAG GAAGTCGAGA TTGCGCTGAC TTCAACCCAG ACCGAGCCAC AGGGCAAGGT GCGTATTGAT TTGCCAGCTT CGTACGGGCG TTTACATGTC TTGCCGTTGA TTCTTGATTT CATGAAGCAG CACCCCAGGC TGCAGCCCCA TGTGTCTTTT TCCGATCGGT ACGTCGACCC GGTGCACGAG GGCATCGATA TCGTCGTCAG GATCGGTGGT TCAGATGCCT GGCCAGCCGC CATCGCTCAC CAGTTTTTTG GAACGCAGAA ACTGATTTTT TGCGCTTCGC CCGAGTATGT AAAACAATAT GGGCAGCCCA AAACGGTGTC GGACCTCGAT GACCACCAGT GCATCGGCTA CGGGCAAAAT GACGGTATGG CGATCCCCTG GTACTTCAAG GGTCGCCAAC CGGGGGATAT GGAGCGCAGG ATCATGCATC CGCACATTGC CGTAGGAGAC GGAGAGGGTG AGGTAATGGC GGTGTTGGCG GGGCTTGGCA TCGCTCAACT ACCGACCTGG CTGGTCCAGG TGCATCTGAA CAGCGGCAGG CTGGTGGAGG TGCTACCGGA TCTTGCTACC GAAGGCCTTC CGATGAATCT TGTCTGGCTT CGAAGTCGCG AGGCGCTGCC AAAAGTCAGC GCTTTGGTCG CCTACCTGGG AGCCAATCTC ACGCCTGCCG GGCGAGTTGA GCGGGCTTGA
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Protein sequence | MFSSERLKGI DVFVIVADMG SFTAAAERLN LTNSAISKSI ARLEGRLRTR LFQRTTRRLS LTEAGETFYR TCTTVLSDLE EVEIALTSTQ TEPQGKVRID LPASYGRLHV LPLILDFMKQ HPRLQPHVSF SDRYVDPVHE GIDIVVRIGG SDAWPAAIAH QFFGTQKLIF CASPEYVKQY GQPKTVSDLD DHQCIGYGQN DGMAIPWYFK GRQPGDMERR IMHPHIAVGD GEGEVMAVLA GLGIAQLPTW LVQVHLNSGR LVEVLPDLAT EGLPMNLVWL RSREALPKVS ALVAYLGANL TPAGRVERA
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