Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_1519 |
Symbol | |
ID | 3367018 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 1706691 |
End bp | 1708157 |
Gene Length | 1467 bp |
Protein Length | 488 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637651861 |
Product | SecC motif-containing protein |
Protein accession | YP_234607 |
Protein GI | 66044766 |
COG category | [R] General function prediction only |
COG ID | [COG3318] Predicted metal-binding protein related to the C-terminal domain of SecA |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.67332 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0279077 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTGAAAC CAATTCTGAA AGAACCCAGT GTCAACGAGA GTGAGAGGGT CCTGTCTGCC ATCGTGTCAA ACACGTTCTT CAGTCTCTGG TGTTATCCGA GCCTGTTCCG CTCAACAGGC AAGGGTAAAG AGTTCGCCGA CCTGACGATT TATTTCAACA ACACTCTCGT CATTTTCTCG GACAAAGGCC ATGTCAACTT TCAGGAGCAC AATGATATCC AGTTGGCCTG GAGCCGCTGG TACCGGGCTG CAGTCAAGGA GTCTGCCAAG CAGCTGCATG GGGCTGAGAG TTTGGTCAGA AACCATCCCG ACAAGCTCTT TCTCAACAGT AAGCTGGAGG ATCCGTTCCC GTTCGATTTG ACTAAACCAG GGTTGAAGAT CCATCTGGTA GCGGTCACTG GCGGGATTGG TCAGCACGCC CAACGTTTCT TCGATTCGGT AGGACCTGGT AGTAATGGAA CGCTGGTGTA CCACTACGAG GTTCCTGAAG ATCTTTTGTT GGAGGAGCCG TTCCTCGTAG GCGATGTCGA TCCACGAAAA ACATTCGTCC ATGTACTTGA TGAAAGCGGT CTGAAGCTGC TTTTCGAGGA GCTGTGCACA CCGGAAGATT TTATCCACTA CCTGGAGACG AAGGAGCGGG TTATTCGTAA TGGAACCTTC TTATCCAGCG CTGGAGAGGA GGAGACGCTC GCAACATATC TGCAGGAAGA TGGTGGGTAC GGTTTCGGCG ATCTGAGAGC ACCGAAGGGC TATGAAGGCC ACGCCTTCAG GATCCCGGAA GGGGAATGGA AGCATTATCG TCAGACAGTG GCTTACGCGC TCCGGTATGG CCATAAGAAA AAGGCGAAGC TCTGGAACGA GATCATCGCT CGATTCGCTG ATGCCATCAC CGAGGCATGT GTAGGTGAGG CCAAGGATCT TCCTTTGATT GGCCATTCAA ATGCTCTTCA GATTTTGGCG TCTGAGAACC TGTATTCAAG CAGCTTTCTG GCATCGGCAA TGCTCGATAA GTTCGACTTG GTGCCCAAGG GCATCCGCTC TGCGCGCACG TTACCGTCCA CCGCCAAGCC AGACCGATTG TATGTATTCG TGTTCTTCCC TTGGGATGAT GGCTTTGCGT CATATCAGGA TTACCGAGAG GCACGGACGG ATTGCATGCA GCTTTACGCA TACGTCGCGA TGTACAAATA CCAGAAAGCG AAGGAGATAT TAATTTTCGG AGCTGACACA AAAGGCGGCC AAGGTGGATC TGAGACGATC TTCGCGGTTG ATGCGACCGT TCCTCTTTCA AGCGAGGAAC GAGAGATGGC TCAGCATACG ATGAAGACCT TAAGGATCCT GGATCACGTT GTAGAAAGAG TGATCCAAAC ATCCAATTCT GGCGCGGATG TCGGACGTAA TGAGCCGTGC CCGTGTGGAT CGAAGAAAAA ATACAAAAAG TGCTGCATGG GTACCGGCAT GCATTGA
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Protein sequence | MLKPILKEPS VNESERVLSA IVSNTFFSLW CYPSLFRSTG KGKEFADLTI YFNNTLVIFS DKGHVNFQEH NDIQLAWSRW YRAAVKESAK QLHGAESLVR NHPDKLFLNS KLEDPFPFDL TKPGLKIHLV AVTGGIGQHA QRFFDSVGPG SNGTLVYHYE VPEDLLLEEP FLVGDVDPRK TFVHVLDESG LKLLFEELCT PEDFIHYLET KERVIRNGTF LSSAGEEETL ATYLQEDGGY GFGDLRAPKG YEGHAFRIPE GEWKHYRQTV AYALRYGHKK KAKLWNEIIA RFADAITEAC VGEAKDLPLI GHSNALQILA SENLYSSSFL ASAMLDKFDL VPKGIRSART LPSTAKPDRL YVFVFFPWDD GFASYQDYRE ARTDCMQLYA YVAMYKYQKA KEILIFGADT KGGQGGSETI FAVDATVPLS SEEREMAQHT MKTLRILDHV VERVIQTSNS GADVGRNEPC PCGSKKKYKK CCMGTGMH
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