| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1388 |
|---|
| Symbol | |
|---|
| ID | 3366883 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | - |
|---|
| Start bp | 1570005 |
|---|
| End bp | 1570697 |
|---|
| Gene Length | 693 bp |
|---|
| Protein Length | 230 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637651727 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_234477 |
|---|
| Protein GI | 66044636 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1720] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00104] probable methyltransferase, YaeB/AF_0241 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.767988 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTACA ACGTCTCCCC TGTCGGCTTC GTGCGCTCCT GCTTCAAGGA GAAGTTTGCC
ATCCCGCGCC AGCCACAGCT TGCACCGGCG GCACGCGGCG TGCTGGAGCT GGTGGCACCG
TTCGATCAGG GTGAAGCGGT TCAGGGGCTG GAACAGGTCA GTCACGTCTG GCTGCTGTTT
CTGTTCCACC TGACGCTGGA AGACAAGCCA CGCCTGAAGG TGCGCCCGCC GCGCCTGGGT
GGCAACCAGT CGATGGGCGT GTTCGCTACC CGCGCAACCC ATCGCCCCAA TGGCATCGGC
CAGTCGGTGG TCAAGCTGGA CAAGGTCGAG CCCGGGCGAC TCTGGCTGTC CGGCATCGAC
CTGCTGGATG GCACGCCGGT GCTGGACATC AAGCCCTATG TGCCCTACGC CGACGCAATC
GCCGACGCGA CCAACCACAT CGCCAGTGCT GCGCCAGACC TGATACCGGT GCGCTGGCAG
GAGGCCGCGC TGCAACAGGC TCGTGAACAC GCGTTGCGCC TGAACGAGCC GCTGGTCGAA
CTGATCGAGC AGTGCCTGGC CCAGGACCCG CGCCCGGCCT ATCAGCTGCC CACGCCGGAA
CGTCGCTATG GTGCTCAGTT CTGGGATCTG GACGTGCGCT GGCACTACCC GCAGGCCGGC
GTGATTTGCG TGCTTGAAGT GCTGCTCGCC TGA
|
|---|
| Protein sequence | MSYNVSPVGF VRSCFKEKFA IPRQPQLAPA ARGVLELVAP FDQGEAVQGL EQVSHVWLLF
LFHLTLEDKP RLKVRPPRLG GNQSMGVFAT RATHRPNGIG QSVVKLDKVE PGRLWLSGID
LLDGTPVLDI KPYVPYADAI ADATNHIASA APDLIPVRWQ EAALQQAREH ALRLNEPLVE
LIEQCLAQDP RPAYQLPTPE RRYGAQFWDL DVRWHYPQAG VICVLEVLLA
|
|---|
| |