Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_1356 |
Symbol | lpxB |
ID | 3366851 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 1536144 |
End bp | 1537286 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637651695 |
Product | lipid-A-disaccharide synthase |
Protein accession | YP_234445 |
Protein GI | 66044604 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0763] Lipid A disaccharide synthetase |
TIGRFAM ID | [TIGR00215] lipid-A-disaccharide synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCAGTC CACTCTGTAT CGCTCTGGTC GCGGGTGAAG CATCCGGCGA TATCCTCGGA TCCGGTCTGA TGCGTGCCCT CAAGGTGCGC CATCCCGACA TCCGCTTCAT TGGTGTCGGC GGTCCGTTGA TGGAAGCCGA AGGCATGCAG TCCTCCTTCC CGATGGAACG CCTGTCGGTG ATGGGGCTGG TTGAAGTGCT CGGGCGACTG CGCGAGCTGC TGGCCCGGCG CAAGCTGTTG GTCCAGACCC TGATCAATGA AAAGCCGGAC GTCTTCATCG GCATTGACGC GCCTGACTTC ACGCTCAATA TCGAACTTCA GCTACGTCGC GCCGGGATCA AGACTGTGCA CTACGTCAGC CCGTCGGTCT GGGCCTGGCG TCAGAAGCGT GTGCTGAAGA TTCGTGAAGG CTGTGACCTG ATGCTGACCC TGTTGCCATT CGAAGCGCGT TTCTACGAAG AGCAGGGCGT ACCGGTGCGT TTTGTCGGTC ATCCGCTGGC AGACACAATT CCTCTGGAGT CTGATCGTGC AGGTGCTCGC GCAGGCCTGG GATTGGCGCA GGAGACGCCG GTTGTCGCGC TGATGCCGGG CAGCCGGGGC GGTGAAGTGG GGCGTCTGGG CGGGTTGTTT TTCGACACGG CCGAGCGGCT GCTTGCCCGG TGCCCAGAGC TGCGCTTCGT ACTGCCCTGC GCCAGCCCGC AGCGACGGGC TCAGGTGGAG CAGTTGCTGC AGGGGCGTGA TCTGCCCGTC ACGCTGCTCG ACGGCCAGTC GCATGTTGCT CTGGCCGCGT GCGATGCGGT ACTGATCGCC TCCGGCACCG CGACCCTGGA GGCGCTGCTT TACAAGCGCC CCATGGTAGT TGCCTATCGC CTGGCGCCGC TGACCTTCTG GATACTCAAG CGAATGGTCA AAAGCCCTTA CGTGTCGCTG CCGAACCTGC TGGCCCAGCG TCTGCTGGTG CCTGAGCTGC TGCAGGACGA CGCTACGCCA GAAGCCCTGG CGCGTACGCT GCTGCCATTG ATCGACGACG GTCGCGAGCA AACCGCCGGT TTTGATGCCA TTCACCGGAT CCTGCGCCGC GATGCGTCCA ATCAGGCCGC CGATGCGGTA TTGAGCCTGC TCGGACGGTC GCCTTCACTG TGA
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Protein sequence | MPSPLCIALV AGEASGDILG SGLMRALKVR HPDIRFIGVG GPLMEAEGMQ SSFPMERLSV MGLVEVLGRL RELLARRKLL VQTLINEKPD VFIGIDAPDF TLNIELQLRR AGIKTVHYVS PSVWAWRQKR VLKIREGCDL MLTLLPFEAR FYEEQGVPVR FVGHPLADTI PLESDRAGAR AGLGLAQETP VVALMPGSRG GEVGRLGGLF FDTAERLLAR CPELRFVLPC ASPQRRAQVE QLLQGRDLPV TLLDGQSHVA LAACDAVLIA SGTATLEALL YKRPMVVAYR LAPLTFWILK RMVKSPYVSL PNLLAQRLLV PELLQDDATP EALARTLLPL IDDGREQTAG FDAIHRILRR DASNQAADAV LSLLGRSPSL
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