Gene Psyr_1250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1250 
Symbol 
ID3366745 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1405806 
End bp1406447 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content60% 
IMG OID637651589 
Producthypothetical protein 
Protein accessionYP_234339 
Protein GI66044498 
COG category[S] Function unknown 
COG ID[COG2976] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.198007 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCGGGTA CCGAAGATGA AGAGCTGGCG GTAATGAAGG ACTGGTGGCA GCGCAACGGC 
AAACCTCTGT TGACCGGCGG TCTGCTTGCG CTGGTCGTGG TTCTGGGTTG GCAGTTCTGG
CACAGGTATC AGGCCAGCCA GTCGCAAGGC GCCTCGATGC TTTATCAGCA ATTGCTGGAA
ACCGCACTGA CGCCCAGTGG CCAGGCAGAC ACCGCACGTG TCGCCGAGAT CTCCGGCAAA
CTGAAAAGCG AATTCGGTGG CACTACCTAC GCACAGTTCG GTAGCCTGTT CGTCGCCAAG
GTGGCGGTCG ATGCCGGCAA GCTGGATGAT GCTGCAGCCG AGCTGAAAAC CGTGGCCGAC
AAGCCTGCCA ACGACACGCT GGGCGAGATC GCCCGTCAGC GTCTGGCACG CGTGCTGGCT
GCGCAGAACA AGACCGATGA CGCGCTGAAG CTGCTCGACG GCGATGCCGA CAAGGCTTTC
CTCGCCAGTC GTGAAGAACT CAAGGGTGAC CTGCTGGTAC AGCTGGGTCG TACCGACGAG
GCGTATGCTG CATACCAAAA GGCCAAATCT GCTCTGTCCG AAGACGCAGC AGTGGGTGGC
CTGCAAATGA AGCTCGACGA TCTGGCGAAA GGGGATGCGT GA
 
Protein sequence
MSGTEDEELA VMKDWWQRNG KPLLTGGLLA LVVVLGWQFW HRYQASQSQG ASMLYQQLLE 
TALTPSGQAD TARVAEISGK LKSEFGGTTY AQFGSLFVAK VAVDAGKLDD AAAELKTVAD
KPANDTLGEI ARQRLARVLA AQNKTDDALK LLDGDADKAF LASREELKGD LLVQLGRTDE
AYAAYQKAKS ALSEDAAVGG LQMKLDDLAK GDA