| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1209 |
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| Symbol | HrcQb |
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| ID | 3366703 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 1366928 |
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| End bp | 1367326 |
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| Gene Length | 399 bp |
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| Protein Length | 132 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637651550 |
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| Product | type III secretion protein HrcQb |
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| Protein accession | YP_234301 |
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| Protein GI | 66044460 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1886] Flagellar motor switch/type III secretory pathway protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.237535 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.472889 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTACTG AAGACCTGTA TCAGGACGAC GTCGAGATGC TCGACGACTA TGAAGAACCG
GTGCCTGAAC AGGCTGATCA GCAACCGCAT GACGACGAAC ACGCCGAGCA GGCATTCGGG
TATGCGGACG AACCGGAGCA TGAAAAGCAG TCAGGAGACC ACCATGAGTC GCCGATGCTC
GACTCACTGG AGCTGGACCT GACCTTGCGC TGCGGCGAGC TCAGATTAAC CCTTGCCGAA
CTGCGCCGAC TGGACGCCGG AACCATTCTC GAAGTCAGCG GCATCGCGCC AGGCCACGCC
ACGCTGTGCC ATGGCGAGCA GGTGGTTGCC GAAGGCGAAC TGGTCGACGT CGAAGGCCGC
CTCGGTTTGC AGATTACCCG GCTGGTGGCG CGCTCATGA
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| Protein sequence | MSTEDLYQDD VEMLDDYEEP VPEQADQQPH DDEHAEQAFG YADEPEHEKQ SGDHHESPML
DSLELDLTLR CGELRLTLAE LRRLDAGTIL EVSGIAPGHA TLCHGEQVVA EGELVDVEGR
LGLQITRLVA RS
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