Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_1131 |
Symbol | |
ID | 3366625 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 1282298 |
End bp | 1282882 |
Gene Length | 585 bp |
Protein Length | 194 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637651472 |
Product | fimbrial protein |
Protein accession | YP_234223 |
Protein GI | 66044382 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3539] P pilus assembly protein, pilin FimA |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0729525 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAAAGC TTTCTCTTAC ATTGGCAGTT CTGGGCGTAA TGGGCGCTGG CATGGCAGGT ACCGCCAGTG CTGCGAACAA CGGCACAATG GTCTTCAACG GAACACTGAC CAATATCTCC TGCGATGTGG GGCCGGGCAC GGGTGTCAGT ACGGGGACCA ACCCTGGCGA AATCAATATC GACCTGGGCA ACGTGTCCTT CTCCGATATC GGTGTATCGA GCGAAAGCCG ATTCGAAACG GCTTCCCCCA TCCAGTTGCT GGTCAACTGC AGTGCGGGTG CCGACCAATA CAACATGGTG AAGATGCGCC TTATTGCCCG TAACGGCAGT GGCCTGGACA ACAACGACGC GAAACTCCTG CGCACCACCG GTGCGGCAGA TGGCGTCGGT ATCGGCCTGC TCAATGCCTC CAGCGTGTTG ATGGATCTGA GCGGTGACGA AACCGTCGAC ACCACACTCA TCAAGGATGG CGCCAGCGGT GCCACCGCTG AAATCAATTT TGGCGCGGTG TATGTGCTTA ACGGCACGCC CACCAATCCG GGTAATGCCG ACGGCTTCCT GCCGTTCGTG ATGGATTACG AGTAA
|
Protein sequence | MKKLSLTLAV LGVMGAGMAG TASAANNGTM VFNGTLTNIS CDVGPGTGVS TGTNPGEINI DLGNVSFSDI GVSSESRFET ASPIQLLVNC SAGADQYNMV KMRLIARNGS GLDNNDAKLL RTTGAADGVG IGLLNASSVL MDLSGDETVD TTLIKDGASG ATAEINFGAV YVLNGTPTNP GNADGFLPFV MDYE
|
| |