Gene Psyr_1046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_1046 
Symbol 
ID3366540 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp1181823 
End bp1184012 
Gene Length2190 bp 
Protein Length729 aa 
Translation table11 
GC content63% 
IMG OID637651389 
Productfusaric acid resistance protein region 
Protein accessionYP_234140 
Protein GI66044299 
COG category[S] Function unknown 
COG ID[COG1289] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0210878 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.52784 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGCCG CTCTGCAACG CATCACCGAC CTGGCGTGGC GTCGCGAGTT GCACAGTTGG 
GCGCGCAGTG ACGGGGTGAC CTGGGTTTAC ATCTTCAAGG TGCTGCTCGC CGCGTTTCTC
ACCTACTGGC TGGCACTGCG CCTGGAACTG CCGCAACCGC ACACGGCGAT GATCACTGTG
TTCATCGTCA TGCAGCCGCA GAGCGGACAA GTGTTCGCCA AGAGTTTTTA TCGCCTGTTG
GGGACGCTGG CCGGATCGGC GATGATGGTG CTGTTGATGG CCCTGTTTGC GCAGAATCCG
CTGCCGTTTC TCGGCAGTCT CGCGCTCTGG GTCGGCCTGT GTTCGGCCGG CGCGGCGCGC
TATCGCAACT TTCGCGCTTA TGGCTTTGTG CTGGCCGGGT ACACGGCAGC CATGGTCGGG
CTGCCTGCGC TGGCGCATCC GGAAGGTTCG TTCATGTCGG CGGTGTGGCG GGTACTGGAA
ATCACCCTGG GGATCCTGTG TTCCACGGCC ATCAGCGCCG CGGTGCTGCC GCAGAGTTCC
AGCGCTGCGA TGCGCAATGC GCTGTATCTG CGCTTCGGCG GGTTCGCGCG CTTCGTGGTC
AACGGCCTGC GCGGCGACAT TTCACGCGCT GAATTCGAAA CTGGCAACGT ACGCTTTGTG
GCCGAAGCCA TCGGCCTGGA AGGGCTGCGC AGCGTCACGG TATTCGAAGA CCCGCACATG
CGTCGCCGCA ACGGTCGACT CAACCGCTTG AACAGCGAAT TCATGACCGT CACCACGCGC
TTCAATGCCC TGCACCAATT GCTCGAGCGT CTGCGTCTCG AACAGGCCGA TCAGGTGTTG
ACGCATATCG ATCCCGGCCT TGAACACCTT GCAGAGCTGC TCGACGGATT CGCCGACCGC
GCCTTGACCA ACGATGACGC GGCGCTGCTG GTCACGCGTC TGGAGTCGTA CAGGGCGCAG
TTTCCCGAGC AGGTCAGAAG CCTGCGCGCC GAACTGGAGC GCACCCTGCC GAGCGACGCC
GAACGACTGG ATTTTCACAC CTCGTTCGAG CTGCTGTACC GGCTGCTCAG CGAGTTGCTC
GACTACGCAC GAACCCACGC ATCGCTGGCC GACCACAGCC ATGAGCGTGA ACAGTGGAAG
GGCTCGTTCG TAGCGCGTAC CCACTGGATG ACCGCGCTGG CAGCCGGCGC CCGGGCGACC
TGCGTGGTCG GGCTGATGAG TCTGTATTGG GTGCTGACGG CGTGGCCCAG CGGCGCGAGC
ATGGTCCTGG CCTCGGCGGC CACCGTTGCG CTGTCGTCGA CCACCCACAA CCCCAGGCGC
ATGTCGCTGC AGATGGCCGG CGGTACATTG CTCGGCGCGC TGTCGGGCTT TCTCGAAACG
TTTTTTCTGT TCCCGCACAT CGACGGTTTT CCGCTGCTGT GCCTGCTGTT GACCCCGGTG
TTTGTGCTCG GCGCGTACCT GGGCTCACGT CCACAGTGGA CGGGATACGG CCTGGGGTTG
CTGATTTTTT TCAGCCTGGG CTCGGTGCCG GACAACCTGA CGGTCTACGA CCCCTACACC
TTCATCAACA ATTACATCGC GATGGTCATC GGCATGCTGA TCTGTGCCGC TGCCGGGGCA
ATTATCCTGC CGCCCAACAG CCGCTGGATG TGGCGGCGCC TGGAGCAGGC CTTGCGCAAT
CAGGTGGTGT TTGCGATCAG CGCGCCGCTC AAGCGTCTGG GCTCAAGCTT CGAAAGCCAG
ACTCGCGACC TGATGCATCA GGCGTACGGC CTGGCGATCG GCAAACCGCT GGTACAGCGC
GAGCTGTTGC GCTGGATGTT CGTGGTGCTG GAAATCGGCC ACGCCATTAT CGAGCTGCGC
CATGAACAGG CGATTCTGCC AATTCACCCT GCCTACGCCG AGTACCAGCC CTGGCGCATC
GCGCTGCGAG TCATGGGGCG CGCCTTGGTG CGCCTGTTCA TCCAGCCTGA CGCGATCAAT
CTGCAGCGCT GTCTGCTGGC CGTCGATCAG GCCATCAAAC GGGTGCAGGA GGCCGATGAA
CCCTTCGCCT CGCATTTCGA TACGTCGGTG CTGCGCCGGG TAAAAAGCTA CCTGCACTTT
ATCCGCACGT CGCTGCTGGA CCCGCAATCG CCGCTGGCCG CTTACAGCGT TGCGCGAACC
GCTTCAGGAG TCGTCCATGC CGCCGCGTGA
 
Protein sequence
MIAALQRITD LAWRRELHSW ARSDGVTWVY IFKVLLAAFL TYWLALRLEL PQPHTAMITV 
FIVMQPQSGQ VFAKSFYRLL GTLAGSAMMV LLMALFAQNP LPFLGSLALW VGLCSAGAAR
YRNFRAYGFV LAGYTAAMVG LPALAHPEGS FMSAVWRVLE ITLGILCSTA ISAAVLPQSS
SAAMRNALYL RFGGFARFVV NGLRGDISRA EFETGNVRFV AEAIGLEGLR SVTVFEDPHM
RRRNGRLNRL NSEFMTVTTR FNALHQLLER LRLEQADQVL THIDPGLEHL AELLDGFADR
ALTNDDAALL VTRLESYRAQ FPEQVRSLRA ELERTLPSDA ERLDFHTSFE LLYRLLSELL
DYARTHASLA DHSHEREQWK GSFVARTHWM TALAAGARAT CVVGLMSLYW VLTAWPSGAS
MVLASAATVA LSSTTHNPRR MSLQMAGGTL LGALSGFLET FFLFPHIDGF PLLCLLLTPV
FVLGAYLGSR PQWTGYGLGL LIFFSLGSVP DNLTVYDPYT FINNYIAMVI GMLICAAAGA
IILPPNSRWM WRRLEQALRN QVVFAISAPL KRLGSSFESQ TRDLMHQAYG LAIGKPLVQR
ELLRWMFVVL EIGHAIIELR HEQAILPIHP AYAEYQPWRI ALRVMGRALV RLFIQPDAIN
LQRCLLAVDQ AIKRVQEADE PFASHFDTSV LRRVKSYLHF IRTSLLDPQS PLAAYSVART
ASGVVHAAA