Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_1046 |
Symbol | |
ID | 3366540 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 1181823 |
End bp | 1184012 |
Gene Length | 2190 bp |
Protein Length | 729 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637651389 |
Product | fusaric acid resistance protein region |
Protein accession | YP_234140 |
Protein GI | 66044299 |
COG category | [S] Function unknown |
COG ID | [COG1289] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0210878 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.52784 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGCCG CTCTGCAACG CATCACCGAC CTGGCGTGGC GTCGCGAGTT GCACAGTTGG GCGCGCAGTG ACGGGGTGAC CTGGGTTTAC ATCTTCAAGG TGCTGCTCGC CGCGTTTCTC ACCTACTGGC TGGCACTGCG CCTGGAACTG CCGCAACCGC ACACGGCGAT GATCACTGTG TTCATCGTCA TGCAGCCGCA GAGCGGACAA GTGTTCGCCA AGAGTTTTTA TCGCCTGTTG GGGACGCTGG CCGGATCGGC GATGATGGTG CTGTTGATGG CCCTGTTTGC GCAGAATCCG CTGCCGTTTC TCGGCAGTCT CGCGCTCTGG GTCGGCCTGT GTTCGGCCGG CGCGGCGCGC TATCGCAACT TTCGCGCTTA TGGCTTTGTG CTGGCCGGGT ACACGGCAGC CATGGTCGGG CTGCCTGCGC TGGCGCATCC GGAAGGTTCG TTCATGTCGG CGGTGTGGCG GGTACTGGAA ATCACCCTGG GGATCCTGTG TTCCACGGCC ATCAGCGCCG CGGTGCTGCC GCAGAGTTCC AGCGCTGCGA TGCGCAATGC GCTGTATCTG CGCTTCGGCG GGTTCGCGCG CTTCGTGGTC AACGGCCTGC GCGGCGACAT TTCACGCGCT GAATTCGAAA CTGGCAACGT ACGCTTTGTG GCCGAAGCCA TCGGCCTGGA AGGGCTGCGC AGCGTCACGG TATTCGAAGA CCCGCACATG CGTCGCCGCA ACGGTCGACT CAACCGCTTG AACAGCGAAT TCATGACCGT CACCACGCGC TTCAATGCCC TGCACCAATT GCTCGAGCGT CTGCGTCTCG AACAGGCCGA TCAGGTGTTG ACGCATATCG ATCCCGGCCT TGAACACCTT GCAGAGCTGC TCGACGGATT CGCCGACCGC GCCTTGACCA ACGATGACGC GGCGCTGCTG GTCACGCGTC TGGAGTCGTA CAGGGCGCAG TTTCCCGAGC AGGTCAGAAG CCTGCGCGCC GAACTGGAGC GCACCCTGCC GAGCGACGCC GAACGACTGG ATTTTCACAC CTCGTTCGAG CTGCTGTACC GGCTGCTCAG CGAGTTGCTC GACTACGCAC GAACCCACGC ATCGCTGGCC GACCACAGCC ATGAGCGTGA ACAGTGGAAG GGCTCGTTCG TAGCGCGTAC CCACTGGATG ACCGCGCTGG CAGCCGGCGC CCGGGCGACC TGCGTGGTCG GGCTGATGAG TCTGTATTGG GTGCTGACGG CGTGGCCCAG CGGCGCGAGC ATGGTCCTGG CCTCGGCGGC CACCGTTGCG CTGTCGTCGA CCACCCACAA CCCCAGGCGC ATGTCGCTGC AGATGGCCGG CGGTACATTG CTCGGCGCGC TGTCGGGCTT TCTCGAAACG TTTTTTCTGT TCCCGCACAT CGACGGTTTT CCGCTGCTGT GCCTGCTGTT GACCCCGGTG TTTGTGCTCG GCGCGTACCT GGGCTCACGT CCACAGTGGA CGGGATACGG CCTGGGGTTG CTGATTTTTT TCAGCCTGGG CTCGGTGCCG GACAACCTGA CGGTCTACGA CCCCTACACC TTCATCAACA ATTACATCGC GATGGTCATC GGCATGCTGA TCTGTGCCGC TGCCGGGGCA ATTATCCTGC CGCCCAACAG CCGCTGGATG TGGCGGCGCC TGGAGCAGGC CTTGCGCAAT CAGGTGGTGT TTGCGATCAG CGCGCCGCTC AAGCGTCTGG GCTCAAGCTT CGAAAGCCAG ACTCGCGACC TGATGCATCA GGCGTACGGC CTGGCGATCG GCAAACCGCT GGTACAGCGC GAGCTGTTGC GCTGGATGTT CGTGGTGCTG GAAATCGGCC ACGCCATTAT CGAGCTGCGC CATGAACAGG CGATTCTGCC AATTCACCCT GCCTACGCCG AGTACCAGCC CTGGCGCATC GCGCTGCGAG TCATGGGGCG CGCCTTGGTG CGCCTGTTCA TCCAGCCTGA CGCGATCAAT CTGCAGCGCT GTCTGCTGGC CGTCGATCAG GCCATCAAAC GGGTGCAGGA GGCCGATGAA CCCTTCGCCT CGCATTTCGA TACGTCGGTG CTGCGCCGGG TAAAAAGCTA CCTGCACTTT ATCCGCACGT CGCTGCTGGA CCCGCAATCG CCGCTGGCCG CTTACAGCGT TGCGCGAACC GCTTCAGGAG TCGTCCATGC CGCCGCGTGA
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Protein sequence | MIAALQRITD LAWRRELHSW ARSDGVTWVY IFKVLLAAFL TYWLALRLEL PQPHTAMITV FIVMQPQSGQ VFAKSFYRLL GTLAGSAMMV LLMALFAQNP LPFLGSLALW VGLCSAGAAR YRNFRAYGFV LAGYTAAMVG LPALAHPEGS FMSAVWRVLE ITLGILCSTA ISAAVLPQSS SAAMRNALYL RFGGFARFVV NGLRGDISRA EFETGNVRFV AEAIGLEGLR SVTVFEDPHM RRRNGRLNRL NSEFMTVTTR FNALHQLLER LRLEQADQVL THIDPGLEHL AELLDGFADR ALTNDDAALL VTRLESYRAQ FPEQVRSLRA ELERTLPSDA ERLDFHTSFE LLYRLLSELL DYARTHASLA DHSHEREQWK GSFVARTHWM TALAAGARAT CVVGLMSLYW VLTAWPSGAS MVLASAATVA LSSTTHNPRR MSLQMAGGTL LGALSGFLET FFLFPHIDGF PLLCLLLTPV FVLGAYLGSR PQWTGYGLGL LIFFSLGSVP DNLTVYDPYT FINNYIAMVI GMLICAAAGA IILPPNSRWM WRRLEQALRN QVVFAISAPL KRLGSSFESQ TRDLMHQAYG LAIGKPLVQR ELLRWMFVVL EIGHAIIELR HEQAILPIHP AYAEYQPWRI ALRVMGRALV RLFIQPDAIN LQRCLLAVDQ AIKRVQEADE PFASHFDTSV LRRVKSYLHF IRTSLLDPQS PLAAYSVART ASGVVHAAA
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