Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_0886 |
Symbol | |
ID | 3366378 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 1008526 |
End bp | 1009530 |
Gene Length | 1005 bp |
Protein Length | 334 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637651229 |
Product | response regulator receiver |
Protein accession | YP_233982 |
Protein GI | 66044141 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG1776] Chemotaxis protein CheC, inhibitor of MCP methylation [COG4753] Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0841257 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCACGC TTGCGCTATT GATATGCGAT GACTCGAACA TGGCGCGAAA GCAGCTGTTG CGCGCGCTAC CTGAAGACTG GGATGTGTCG GTCACGCTGG CCACCCAGGG GCAGGAAGGC CTGGAAGCGA TTCGTAAAGG TCAGGGCCAG GTGGTCCTGC TCGACCTGAC CATGCCGGTG ATGGACGGTT ACCAGACGCT GACGGCGATT CGTGACGAAA ACCTCGACGC CAAGGTGATT GTGGTGTCGG GCGACGTGCA GGACGAAGCC GTGCGTCGGG TCATGGAGTT GGGCGCGCTG GCGTTTCTGA AAAAACCTGC CGACCCGGAC GAACTGAAAA GCACGCTGGA GCGCCTGGGC CTGCTGGGCA AGCCTGCGGC GTCACCGGTT GCACTGCCGG CCCTCAACAA CAAGGGCGGG GTGATCAGCT TTCAGGATGC GTTCCGCGAA ACCGTCAACG TAGCCATGGG CCGTGCAGCG GCGTTGCTGG CCAAGGTACT GGGTGTCTTT GTGCAGTTGC CGGTGCCCAA CGTCAACATG CTTGAAGTTG GTGAGCTGCA CATGGCGCTG GCCGATGCGC ACAGCGATCA GCGCCTGACT GCGGTGTGTC AGGGCTACAT CGGTGGCGGT ATTGCAGGCG AGGCGCTGCT GATTTTCCAC GACTCGGAAA TTTCCGGTAT CTCGCAGCTG ATGGGCGGCG ATCACTCCGA CAGTTCCGAC ATGGAGATGC TCCTTGACCT GTCCACGATC CTGATCGGTG CCTGCCTGAG CGGGATTGCC GAACAGATCG ACATCGCCTT TTCGCAGGGC CATCCACAGT TGCTGGGTGC ACAGGGCGGC ATCGACGAGC TTATCCGCAT CAATCAGCAA CGCTGGAAAA AGACCCTGGC GGTCGAAATC AGTTACAGCG TGGAAGGCCA CAATCTGCAT TTCGATCTGC TGATGCTGTT CACCGAAGAT TCGGTCGAGC TGCTTACCAA AAAACTCGCC TACATGATGA GCTGA
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Protein sequence | MSTLALLICD DSNMARKQLL RALPEDWDVS VTLATQGQEG LEAIRKGQGQ VVLLDLTMPV MDGYQTLTAI RDENLDAKVI VVSGDVQDEA VRRVMELGAL AFLKKPADPD ELKSTLERLG LLGKPAASPV ALPALNNKGG VISFQDAFRE TVNVAMGRAA ALLAKVLGVF VQLPVPNVNM LEVGELHMAL ADAHSDQRLT AVCQGYIGGG IAGEALLIFH DSEISGISQL MGGDHSDSSD MEMLLDLSTI LIGACLSGIA EQIDIAFSQG HPQLLGAQGG IDELIRINQQ RWKKTLAVEI SYSVEGHNLH FDLLMLFTED SVELLTKKLA YMMS
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