| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_0870 |
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| Symbol | |
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| ID | 3366362 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | - |
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| Start bp | 991373 |
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| End bp | 992566 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637651213 |
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| Product | GGDEF |
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| Protein accession | YP_233966 |
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| Protein GI | 66044125 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.534122 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGTTT CTGCCCTTGA ACGTCCCAGC CTTGAAGATG CGCAACTCCT TGCCGAGGTC
GAGCAGACGA TCACTTCAGG TGTTGGCTCG TTACGCTTCA GCCGTGTTCT TGAGCAACGC
TATCAGGAAG AAACCCGGCT GCCGCGGCGC GAGTTCCTGA CGGCGGTAGG GATTGGCGGC
AGTCTGGTCT ACAACCTGTT TCTGATCAGC GACTGGTTGA TATTGCGGGA TGTCTTTGCC
TATGTCGCGG TGGGCCGTCT GTGCCTGATT ACGCCGATGT TTATCGCGCT GCTGATGCTG
GCCCAACGGG TTGCTACGCG CTGGGCGATG GAAACGATTG CAGCATTCGC CACGGTAGTG
TGCTCGCTCA TGCCAATGCT GGTCATGATT CACAGCGACA GCCCTTATCA AATCTTTTAT
CAACTCGGCA TGCTGTTGAT CATGGTCTAC TGCACCATGA TCCAGCAATT GCCGTTGCGC
CATGCCGCTG TCGCCATGTT ATGCATGCTG ATCATCCAGT TGGTGACCAC CTACATTGCC
GACTTCGCCG ATTTTGTGAT CTGGCAGGCC AATGCCGTGT TGTTTGTTTC GACAGTGGCA
CTGTTGCTGA TGGCCTCCTA CTTTCTGGAG CGGGCAAGCC GCATGAGCTA CCTGTTTGCG
CTTCGCGGAC GCCTGCTTCA AGTGCAATTG ATGGAGTTCG CGCGTACCGA TGGGCTGACC
CGACTGTTCA ATCGACGCTA TCAGGACGAA GTGATGGCGT CAGTCTGGGA ACACGCTCGC
AATGCACCGG CGAACGTGGC CATCATCCTG CTGGACATCG ATCACTTCAA ATCCTACAAC
GACAACTACG GTCATCCACA AGGGGATACC TGCCTCAGAT TGCTCTGTCA GAAACTCCAG
CAAAGCGCGC ATGAGCATGG TGCTGTGGCG TTCCGGTTCG GCGGCGAAGA GGTGCTGGTG
CTGATGATCG GCGATGTCGT GCAGGCCAGG GAAGTGGCCG GGGCCCTGCA GAGCGCGGTT
GCCGAGCTCA AGTTGCCGCA TCCGGTGCTG GGCGAAAACG CGCTGGTCAC CATCAGCCTC
GGCGTGGCCT GTGCGACAGC GCCTCTGACC AGTGCCGAGA ACCTGATTGG CGCGGCTGAC
AATGCCCTCT ACGCAGCCAA GCGCGCCGGA CGTAATTGCG TGTGCTTCGC GTGA
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| Protein sequence | MLVSALERPS LEDAQLLAEV EQTITSGVGS LRFSRVLEQR YQEETRLPRR EFLTAVGIGG
SLVYNLFLIS DWLILRDVFA YVAVGRLCLI TPMFIALLML AQRVATRWAM ETIAAFATVV
CSLMPMLVMI HSDSPYQIFY QLGMLLIMVY CTMIQQLPLR HAAVAMLCML IIQLVTTYIA
DFADFVIWQA NAVLFVSTVA LLLMASYFLE RASRMSYLFA LRGRLLQVQL MEFARTDGLT
RLFNRRYQDE VMASVWEHAR NAPANVAIIL LDIDHFKSYN DNYGHPQGDT CLRLLCQKLQ
QSAHEHGAVA FRFGGEEVLV LMIGDVVQAR EVAGALQSAV AELKLPHPVL GENALVTISL
GVACATAPLT SAENLIGAAD NALYAAKRAG RNCVCFA
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