Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_0836 |
Symbol | |
ID | 3366323 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 948197 |
End bp | 949369 |
Gene Length | 1173 bp |
Protein Length | 390 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637651174 |
Product | hypothetical protein |
Protein accession | YP_233932 |
Protein GI | 66044091 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00149421 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCCAGC CTTACAGTGC GCGCAGTCGC GCCATAGAAC CTTTTCATGT CATGGCGTTG CTGGCGCGTG CCAATGAATT GCAGGCGGCG GGTCATGATG TGATTCACCT TGAAATCGGC GAGCCCGATT TCACCACTGC AGAGCCCATC ATAAAGGCTG GCCAGGCGGC ACTGGCAGAC GGCAAGACGC GCTACACCGC CGCGCGCGGT CTGCCGCAAC TGCGTGAGGC CATTTCCGGG TTTTACGCTC AGCGTTACGG CGTCGACATT GATCCTCAGC GGATTCTGGT CACGCCGGGC GGTTCAGGCG CCTTGTTGCT GACCAGCAGC CTGCTGGTCG ATCCGGGCAG GCACTGGTTG CTGGCCGACC CTGGCTACCC GTGCAATCGC CACTTTTTGC GCCTGATAGA AGGCGAAGCG CAACTGGTGC CCGTCGGTCC GCAACAGCGT TATCAACTGA CCCCCGAGCT GGTGGCCACG CACTGGAATC ACAACAGTGT CGGCGCTCTG GTGGCGTCAC CGGCCAATCC GACCGGCACC CTGTTGAGCC GCGACGAACT GGCAGCCTTG TCTCAGGCAC TGAAAGTCCG CAATGGGCAC TTGGTGGTGG ACGAGATCTA TCACGGCCTG ACCTACGGTG TGGACGCCAG CAGTGTGCTG GAAGTGGATA ACGACGCTTT CGTTCTCAAT AGTTTTTCAA AGTATTTCGG CATGACCGGG TGGCGTCTGG GCTGGCTGGT CGCGCCACAG GATGCCGTGG CCGATCTGGA AAAGCTGGCC CAGAACCTCT ACATCAGCGC GCCAAGCATG GCGCAACATG CCGCGCTTGC CTGCTTTGAG CCGCAGACAC TGGCCATACT CGAGCAGCGG CGCGCCGAGT TCGGCCGCCG CCGGGACTTT CTGCTGCCAG CGCTGCGCGA ACTGGGTTTC GGTATTGCCG TCGAGCCGGA AGGGGCCTTT TATTTGTATG CCGACATCTC CGCGTTTGGC GGCGATGCCT TTGCCTTTTG CCGGCACTTT CTGGAAACCG AGCACGTCGC CTTTACACCA GGCCTCGATT TCGGCCGTTT TCAGGCCGGG CACCATGTGC GCTTTGCCTA CACGCAGAGC CTGCCGCGCC TTGAGCAGGC GGTCGAGCGA ATCGCTCGTG GTCTGCGTAG CTGGGGTGTC TGA
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Protein sequence | MSQPYSARSR AIEPFHVMAL LARANELQAA GHDVIHLEIG EPDFTTAEPI IKAGQAALAD GKTRYTAARG LPQLREAISG FYAQRYGVDI DPQRILVTPG GSGALLLTSS LLVDPGRHWL LADPGYPCNR HFLRLIEGEA QLVPVGPQQR YQLTPELVAT HWNHNSVGAL VASPANPTGT LLSRDELAAL SQALKVRNGH LVVDEIYHGL TYGVDASSVL EVDNDAFVLN SFSKYFGMTG WRLGWLVAPQ DAVADLEKLA QNLYISAPSM AQHAALACFE PQTLAILEQR RAEFGRRRDF LLPALRELGF GIAVEPEGAF YLYADISAFG GDAFAFCRHF LETEHVAFTP GLDFGRFQAG HHVRFAYTQS LPRLEQAVER IARGLRSWGV
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