Gene Psyr_0836 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0836 
Symbol 
ID3366323 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp948197 
End bp949369 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content62% 
IMG OID637651174 
Producthypothetical protein 
Protein accessionYP_233932 
Protein GI66044091 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0436] Aspartate/tyrosine/aromatic aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00149421 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCCAGC CTTACAGTGC GCGCAGTCGC GCCATAGAAC CTTTTCATGT CATGGCGTTG 
CTGGCGCGTG CCAATGAATT GCAGGCGGCG GGTCATGATG TGATTCACCT TGAAATCGGC
GAGCCCGATT TCACCACTGC AGAGCCCATC ATAAAGGCTG GCCAGGCGGC ACTGGCAGAC
GGCAAGACGC GCTACACCGC CGCGCGCGGT CTGCCGCAAC TGCGTGAGGC CATTTCCGGG
TTTTACGCTC AGCGTTACGG CGTCGACATT GATCCTCAGC GGATTCTGGT CACGCCGGGC
GGTTCAGGCG CCTTGTTGCT GACCAGCAGC CTGCTGGTCG ATCCGGGCAG GCACTGGTTG
CTGGCCGACC CTGGCTACCC GTGCAATCGC CACTTTTTGC GCCTGATAGA AGGCGAAGCG
CAACTGGTGC CCGTCGGTCC GCAACAGCGT TATCAACTGA CCCCCGAGCT GGTGGCCACG
CACTGGAATC ACAACAGTGT CGGCGCTCTG GTGGCGTCAC CGGCCAATCC GACCGGCACC
CTGTTGAGCC GCGACGAACT GGCAGCCTTG TCTCAGGCAC TGAAAGTCCG CAATGGGCAC
TTGGTGGTGG ACGAGATCTA TCACGGCCTG ACCTACGGTG TGGACGCCAG CAGTGTGCTG
GAAGTGGATA ACGACGCTTT CGTTCTCAAT AGTTTTTCAA AGTATTTCGG CATGACCGGG
TGGCGTCTGG GCTGGCTGGT CGCGCCACAG GATGCCGTGG CCGATCTGGA AAAGCTGGCC
CAGAACCTCT ACATCAGCGC GCCAAGCATG GCGCAACATG CCGCGCTTGC CTGCTTTGAG
CCGCAGACAC TGGCCATACT CGAGCAGCGG CGCGCCGAGT TCGGCCGCCG CCGGGACTTT
CTGCTGCCAG CGCTGCGCGA ACTGGGTTTC GGTATTGCCG TCGAGCCGGA AGGGGCCTTT
TATTTGTATG CCGACATCTC CGCGTTTGGC GGCGATGCCT TTGCCTTTTG CCGGCACTTT
CTGGAAACCG AGCACGTCGC CTTTACACCA GGCCTCGATT TCGGCCGTTT TCAGGCCGGG
CACCATGTGC GCTTTGCCTA CACGCAGAGC CTGCCGCGCC TTGAGCAGGC GGTCGAGCGA
ATCGCTCGTG GTCTGCGTAG CTGGGGTGTC TGA
 
Protein sequence
MSQPYSARSR AIEPFHVMAL LARANELQAA GHDVIHLEIG EPDFTTAEPI IKAGQAALAD 
GKTRYTAARG LPQLREAISG FYAQRYGVDI DPQRILVTPG GSGALLLTSS LLVDPGRHWL
LADPGYPCNR HFLRLIEGEA QLVPVGPQQR YQLTPELVAT HWNHNSVGAL VASPANPTGT
LLSRDELAAL SQALKVRNGH LVVDEIYHGL TYGVDASSVL EVDNDAFVLN SFSKYFGMTG
WRLGWLVAPQ DAVADLEKLA QNLYISAPSM AQHAALACFE PQTLAILEQR RAEFGRRRDF
LLPALRELGF GIAVEPEGAF YLYADISAFG GDAFAFCRHF LETEHVAFTP GLDFGRFQAG
HHVRFAYTQS LPRLEQAVER IARGLRSWGV