Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_0786 |
Symbol | |
ID | 3366273 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 892574 |
End bp | 894691 |
Gene Length | 2118 bp |
Protein Length | 705 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637651124 |
Product | CheW-like protein:ATP-binding region, ATPase-like:Signal transducing histidine kinase, homodimeric:Hpt |
Protein accession | YP_233882 |
Protein GI | 66044041 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0643] Chemotaxis protein histidine kinase and related kinases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.380059 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGTATTA ATCTCGATCA GGCACAGCAG ACGTTCATCG TTGAAGCGCG AGAGCTTTTG CAGGCCATGG AGGAATCCCT CCTGCAACTC GAAAGCGAGC CCGGCGACCT GGACGCGATC GGCGCGGTCT TCCGCGCAGC GCACACCATC AAAGGCTCGG CCGGACTGTT CGGGCTGACG CCTATCGTCA GTTTTACTCA CATCGTCGAA GACGTGCTGG ATCGTCTGCG TGAAGGCAGT GTTTCGGTAA ACGCCGAGCT GATCGCCGTG CTGCTCAAAT CCGGCGATCA CATGCTTGAG TTGATCGACG TGGTCGCCAG CCGTGGCGAG CAACTGCAGC AGCCTGCACT GGAGCGCGAG GCAGCGCTGC GTCAGGCGTT GCAGGTCTTC CAGGCACCGG CCAGCGCCAG CGCCGCTGAC ATCGCAAGTG CGCAGGTCGT CAGCGATGAT GAACAGTCAG CCGACGTGCT CTGGCATATC TCGCTACGTT TTGGCGTGGA TGTGTTTCGC AACGGCATGG ACCCGCTGTC GTTCCTGCGC TACCTCAATA CCCTGGGGCA GATGGTCCAG GTCACGACGC TGACCGACAG CATTCCAACA GTTGAAGCGT GGGACCCGGA ATCCTGCCAC CTGGGCTTCG AGATCGATTT CCGCTCTGCT GCCGGGCACG CCGCGATCAA CGAAGTCTTC GATTTCGTGC GTGAAGACTG CGCGGTGGAA ATCACGCCGC TGGACGAAAC GCCAGACCAC GTCGAGCCCA CCGGCACCGA ACTGGTCTCG CAGCCCGAAC ACAGCCCTGT GGTGGCCAGC GGCGAACTGC TGGGCGATCA GCGCGCAGTG CCACGTACGC CCGCAACGGC AACGGCAACG GCAACCGCTG TAGAGCGCCC TTCTTCGGGC AGCGAGCAGA AAAACAAGGA TGGCCGCTAT GTGCGCGTCA ACGCCGACAA GCTCGACGAG CTGATCAATC TGGTCGGCGA GCTGGTCATT GCCAGCGCCG GCGCCAGCCT GCTGGCCAAG TCGTGCGACA ACGACCCGCT TCAGGAAGCC AGCTCGACGG TGTCGGGGCT GGTCGAGCAG ATTCTGGATG GCGCGCTGCA CCTGCGCATG ATCCCGATCG GCGACACCTT CAATCGCTTC CGCCGAGTGG TGCGCGATGT CAGTCAGGAA CTGGGCAAGG ACATCGACCT GATTATCAAT GGCGCGGAGA CCGAACTGGA CAAGACCGTC GTCGAAAAGA TCGGCGACCC GCTCATGCAC CTGCTGCGCA ATTCCATGGA TCACGGCATC GAGAGCGCCG AAGCGCGTCG CGCGGCGGGC AAGCCGGCCA AAGGTCATTT GAGCCTCAAT GCGTACCACG ACTCGGGCAG CATCGTCATC GAAATCGCCG ACGACGGGGC CGGACTCAAC CGCGAGCGCA TCCTCGACAA GGCCCAGCAA CGCGGACTGG TGGCGGCCGG CGCAAGCCTC ACCGATCAGG AAATCTACAA CCTGATTTTC GAGCCCGGCT TTTCCACTGC CGAGGCCGTC ACCAACCTTT CGGGGCGTGG TGTCGGCATG GACGTGGTCA AGCGCAACAT TACCTTGCTG CGCGGCACGG TGGATCTGGA CAGTCAGCCC GGTCAGGGCA CCATCGTGCG CATCCGCTTG CCGCTGACGC TGGCGATCAT CAACGGCTTT CTGGTCGGTA TCGATCAGTC GACTTACGTG ATCCCGCTGG ACATGGTGCA GGAATGCATC GAGCTGGACG AACACAACCG GCAGTTGACC CGCGACAGCG GCTACCTGGA CCTGCGTGGC GAAGTGCTGC CGCTGGTCTA CCTGCGCGAC CACTTCAATC ATGAAGGCCC GGCCGCCAGG CGCCAGAACG TGGTGGTGGT GCGTTACGCC GAGCACAAGG CCGGGCTGGT GGTCGATGAC CTGCTGGGCG AGTTCCAAAC CGTTATCAAA CCTCTGGGCA AGCTGTTCGG CGCGCTGCGC GGCATCAGCG GCTCGACGAT CCTGGGCAGT GGCGCGGTGG CGTTGATTCT CGACATTCCC GCCCTGCTCA ACCAGATCGT ACACATGGAG GCCCGCTCGA CCCAGGCGCC TCAATTCCTG CTGCCCACTT CTCGCTGA
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Protein sequence | MSINLDQAQQ TFIVEARELL QAMEESLLQL ESEPGDLDAI GAVFRAAHTI KGSAGLFGLT PIVSFTHIVE DVLDRLREGS VSVNAELIAV LLKSGDHMLE LIDVVASRGE QLQQPALERE AALRQALQVF QAPASASAAD IASAQVVSDD EQSADVLWHI SLRFGVDVFR NGMDPLSFLR YLNTLGQMVQ VTTLTDSIPT VEAWDPESCH LGFEIDFRSA AGHAAINEVF DFVREDCAVE ITPLDETPDH VEPTGTELVS QPEHSPVVAS GELLGDQRAV PRTPATATAT ATAVERPSSG SEQKNKDGRY VRVNADKLDE LINLVGELVI ASAGASLLAK SCDNDPLQEA SSTVSGLVEQ ILDGALHLRM IPIGDTFNRF RRVVRDVSQE LGKDIDLIIN GAETELDKTV VEKIGDPLMH LLRNSMDHGI ESAEARRAAG KPAKGHLSLN AYHDSGSIVI EIADDGAGLN RERILDKAQQ RGLVAAGASL TDQEIYNLIF EPGFSTAEAV TNLSGRGVGM DVVKRNITLL RGTVDLDSQP GQGTIVRIRL PLTLAIINGF LVGIDQSTYV IPLDMVQECI ELDEHNRQLT RDSGYLDLRG EVLPLVYLRD HFNHEGPAAR RQNVVVVRYA EHKAGLVVDD LLGEFQTVIK PLGKLFGALR GISGSTILGS GAVALILDIP ALLNQIVHME ARSTQAPQFL LPTSR
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