Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_0479 |
Symbol | |
ID | 3365955 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 517592 |
End bp | 518269 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637650819 |
Product | NLP/P60 |
Protein accession | YP_233587 |
Protein GI | 66043746 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.972324 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTCCTT TTTTCAAGAC ATGGCTAACC ATTTGCCTAT TTATGCCTCT GGCCGCCCAC GCCACCAATC GTGAGCAACA ACTTCCTGCG AGCTTCTCGG GCTACACCGC CAAAAGCCAC TCTTCACCGG CACTCGCGAC TCGCAATGCA CCCCAGGAAG CCGCCACCAC CCGAACTCAG TACGGCGCCA CCGCTGCCGT CCAGAAGCCG CTTTCACGCA AGAACGCCAA GAAAGTCGCG GCCTTGCAGG CTTCCGCCCC CGCCAAGCAA GGCAGCGCCG TTGTAAAGCG CGCCTTGCAG GCTGTGGGCA CGCCTTATCG CTGGGGCGGC ACCACGCCTG GCAAAGGCCT GGACTGCAGC GGACTGGTCA AATACGCCTA CACGGATGTC CGTGAGGTCG ACCTGCCGCG CACCTCCAAT GCCATGGCCC AAGGTCATGG TCAGACGGTG GATCGCAAGG ACCTGAAGCC CGGTGATCTG CTGTTCTTCA ACATCAAGAG CCGCAACATC AACCACGTGG CCATTTACCT GGGCGACAAC AAGTTCGTTC ATGCGCCGCG CCGTGGCAAG GCCGTAACTG TCGATACGCT GAACAAACCG TATTGGAACA GCCACTACAA GATTGCCAAG CGTGTGCTGC CCAAGCAGGC AGGGCAGATG CGTGTGGTTC AGCGCTGA
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Protein sequence | MRPFFKTWLT ICLFMPLAAH ATNREQQLPA SFSGYTAKSH SSPALATRNA PQEAATTRTQ YGATAAVQKP LSRKNAKKVA ALQASAPAKQ GSAVVKRALQ AVGTPYRWGG TTPGKGLDCS GLVKYAYTDV REVDLPRTSN AMAQGHGQTV DRKDLKPGDL LFFNIKSRNI NHVAIYLGDN KFVHAPRRGK AVTVDTLNKP YWNSHYKIAK RVLPKQAGQM RVVQR
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