Gene Psyr_0460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0460 
Symbol 
ID3365936 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp498180 
End bp499589 
Gene Length1410 bp 
Protein Length469 aa 
Translation table11 
GC content59% 
IMG OID637650800 
ProductS-adenosyl-L-homocysteine hydrolase 
Protein accessionYP_233568 
Protein GI66043727 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0499] S-adenosylhomocysteine hydrolase 
TIGRFAM ID[TIGR00936] adenosylhomocysteinase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGCTG TAATGACGCC CGCAGAATTC AATGACTACA AGGTTGCCGA TATTTCCCTG 
GCCGCCTGGG GTCGCCGCGA AACCATCATC GCCGAATCCG AAATGCCTGC CCTGATGGGT
CTGCGTCGCA AATACGCCGG TGATCAGCCG CTGAAAGGCG CGAAGATTCT CGGTTGCATC
CACATGACCA TTCAGACCGC CGTACTGATC GAAACCCTGG TTGCCCTGGG TGCCGAAGTT
CGCTGGTCGT CGTGCAACAT TTTCTCGACT CAGGACCAGG CTGCTGCGGC CATCGCTGCT
GCCGGCATTC CTGTGTTCGC CTGGAAAGGC GAAACCGAAG AAGAATACGA GTGGTGCATC
GAGCAGACCA TCCTCAAGGA TGGCCAGCCA TGGGATGCCA ACATGATCCT CGACGACGGC
GGCGACCTGA CCGAGATCAT CCACAAGAAA TACCCGGCAA TGCTGGACAA GATCCACGGC
GTCACCGAAG AAACCACCAC GGGCGTGCAC CGCCTGCTGG ACATGCTGGC CAAGGGCGAG
CTGAAAATCC CGGCCATCAA CGTCAACGAC TCGGTGACCA AGAGCAAGAA CGACAACAAG
TACGGCTGCC GTCACAGCCT GAACGACGCC ATCAAGCGCG GCACCGACCA CTTGCTGTCC
GGCAAGCAGG CGCTGGTGAT CGGCTACGGC GACGTGGGCA AGGGCTCGGC CCAGTCCCTG
CGTCAGGAAG GCATGATCGT CAAAGTGACC GAAGTCGACC CGATCTGCGC CATGCAGGCC
TGCATGGACG GTTTCGAGCT GGTTTCGCCG TTCATCGACG GTGAGAACGA CGGCACCGAA
GCGAGCATCG ACAAGGCACT GTTGGGCAAG ATCGACCTGA TCGTGACCAC CACCGGTAAC
GTCAACGTTT GCGACTCCAA CATGCTCAAG GCGCTGAAAA AGCGCGCTGT GGTGTGCAAC
ATCGGTCACT TCGACAACGA AATCGACACC GCTTTCATGC GCAAGAACTG GGCATGGGAA
GAAGTGAAGC CACAGGTTCA CAAGATCCAC CGTACCGGCC CAGGCTCGTT CGACGCACAG
AACGACGACT ACCTGATCCT GCTGGCCGAA GGCCGTCTGG TAAACCTGGG TAACGCCACT
GGCCACCCAA GCCGCATCAT GGATGGCTCG TTCGCCAACC AGGTTCTGGC GCAGATCTTC
CTCTTCGAGC AGAAGTACGC CGACCTGGCA CCCGCCAAGA AATCCGAGCG CCTGACCGTT
GAAGTACTGC CGAAGAAACT CGACGAAGAA GTGGCCCTGG AAATGGTCCG CGGCTTCGGT
GGCGTTGTGA CCAAGCTGAC CAAGACCCAG GCCGATTACA TCGGTGTGAC CGTCGAAGGT
CCGTTCAAGC CAGACGCTTA TCGCTATTGA
 
Protein sequence
MSAVMTPAEF NDYKVADISL AAWGRRETII AESEMPALMG LRRKYAGDQP LKGAKILGCI 
HMTIQTAVLI ETLVALGAEV RWSSCNIFST QDQAAAAIAA AGIPVFAWKG ETEEEYEWCI
EQTILKDGQP WDANMILDDG GDLTEIIHKK YPAMLDKIHG VTEETTTGVH RLLDMLAKGE
LKIPAINVND SVTKSKNDNK YGCRHSLNDA IKRGTDHLLS GKQALVIGYG DVGKGSAQSL
RQEGMIVKVT EVDPICAMQA CMDGFELVSP FIDGENDGTE ASIDKALLGK IDLIVTTTGN
VNVCDSNMLK ALKKRAVVCN IGHFDNEIDT AFMRKNWAWE EVKPQVHKIH RTGPGSFDAQ
NDDYLILLAE GRLVNLGNAT GHPSRIMDGS FANQVLAQIF LFEQKYADLA PAKKSERLTV
EVLPKKLDEE VALEMVRGFG GVVTKLTKTQ ADYIGVTVEG PFKPDAYRY