Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_0310 |
Symbol | |
ID | 3365786 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 329734 |
End bp | 331704 |
Gene Length | 1971 bp |
Protein Length | 656 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637650653 |
Product | HNH endonuclease:S-type Pyocin |
Protein accession | YP_233421 |
Protein GI | 66043580 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.251526 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGATG AGCAAGAAAA ACATATATAT GTAAAATACT GGCCTATTCC AGACTTAGGG TCCGCAGACC GGGCAGCGGC CGAGGCAGCT GCTAATAAAG CGAGTGGTGG AGGTAATTCA GGCTGGAGCA TTGGAATCGG TGGTGGCGGC GGCGGACCCA GCACTACCGG CCTAGGCCCA GGGCGCGGTC GCCGAAGAGG TATCACTAAT AAACAGCTGA GACGTCTATT AAGGCAACAA GAGGCAGAGG CGCATGCGTT GGCCCAGCGG CAAGCGGCAG AACACGCGGC TCATCTCGCA AGACTAGAAG CTGAGGCGCA TGCTCGGGCA ATGGCGGAAG CCGCCGAGCG AGAGCGCGTT GAAACGCAGG TGCGCGCACA GGCCGAAAAA GATCAGGCAC ATCGACAGGC TCTTGAAACG CTGACAGCGT CCTATCCCTC GTTACAATCT GGATTGGCAC AAAACTACTT ACTGGCTTCT GCATCGCTGC CAAATGATCT TCAAAAAGAA ATAGCGTCAG GTCATGATCT AAATGCTGAT CCCCCACGCG ACGAACAGGC TCTTGAGCTG ATACTTCAGA AAAAAATCAG GGTTAACTAT TTACTTGCAA TCAAACAACC GTTACTGGAA GAGCGTCGCG CTCAGGCTCT GAGTCTCACC GGTCAAGAGC TTGACCATGC TACACAAAAA GACCACCTGA ACTATCTGGT GTACTACAGC CAGGGTGATC CTCCACGTGT GCAGCAGGCC CATGAAGCGT GGATACAGGC GTTATCTCAG ACCTACGAAG CAAAGCTTCT TGCCGAATCG GTCACGCTGC TCAACGAACA ATCAGCAGCG CTTTCCATGC GCCATGCTGA ACTGTCGCTG GCCAATAAAC CGGCGAGTCA GGATGCACGA CAGGCCGCTG GCATCGACAA GCTGTGGTCA GTTATTGCCC CCGCGTCAAC CACCACCGCA GCAACAGGCA TCAGAACCGT CGCGACCAAC ATCGCGAAGG ATCAACTCAT CAGGATTGCA ACCAGAACAC TGGGCAGCAA TCTGGTTACG TTGCTGGCGA TGTATCCACA ACCGTTGGGC GACGCAGAAC TGCCGCCCGC CGTTATCGCC ACACCTCTGT CGCAGCTCAA CCTGCCGCCG CATATCGATC TGCACTACCT TGCCAGCGTC AAAGGCACGC TGGATGTGCC TCATCGACTG ACATCCGATG AAGCTGGCAC AAGCGGCGCT GCACGCTGGG TAGCTACGGA CGGTGTGGAA GTTGGTACCA AGGTTCGCGT AAGAACTTTC ACCTATAACG CACAGAACAA TTCCTACGAG TTTATCCGTG ACGGGGAATC GACACCGGCA CTGATATGGA CGCCAATAGC ACGACCGGCG GACAGCTCGA CAAGCTCACC CGCAGGACCA CCCGCTTTGC CGGTAGATCC AGGCAACGTG GTGACACCTT TTGTACCCGA GCTTGAAGCT TACCCGGCGA TTGATCGAGA TGATCCTGAT GATTACATTC TCATATCGCC GATTGATTCA GGGCTGCCGA ATAGCTACCT GCTGTTCAAG GACCCGAGGT CGATTCCGGG GGTTGCGAGT GGGTATGGTG AAGCGGTCAA TGGAGTTTGG CTAGGGGACA AAACTCGGGC AGAGGGCGCA TCAATTCCGG CGCATATCGC AGATCAATTG CGTGGACGAC GATTTGGTAA TTTTGACTCA CTGAGGAAAG CAACTTGGAT AGCCGTAGCC AATGATCCCG AGTTAGTTAA ACAGTTTACT CAACATAACC TTGAAATAAT GCGAGATGGC GGTGCGCCAT ACCCAAGGCT AGTCGACCAA GCTGGGGGCC GTACAAAATT TGAAATCCAC CATAAAAAAC ATATTGCAAA CGGAGGTGCA GTGTACGACA TCGACAACTT GGTTATCATG ACCCCAAGAC AACATATTGA CCATCACAGG AGCCATGAGA ATGATCTTTA A
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Protein sequence | MADEQEKHIY VKYWPIPDLG SADRAAAEAA ANKASGGGNS GWSIGIGGGG GGPSTTGLGP GRGRRRGITN KQLRRLLRQQ EAEAHALAQR QAAEHAAHLA RLEAEAHARA MAEAAERERV ETQVRAQAEK DQAHRQALET LTASYPSLQS GLAQNYLLAS ASLPNDLQKE IASGHDLNAD PPRDEQALEL ILQKKIRVNY LLAIKQPLLE ERRAQALSLT GQELDHATQK DHLNYLVYYS QGDPPRVQQA HEAWIQALSQ TYEAKLLAES VTLLNEQSAA LSMRHAELSL ANKPASQDAR QAAGIDKLWS VIAPASTTTA ATGIRTVATN IAKDQLIRIA TRTLGSNLVT LLAMYPQPLG DAELPPAVIA TPLSQLNLPP HIDLHYLASV KGTLDVPHRL TSDEAGTSGA ARWVATDGVE VGTKVRVRTF TYNAQNNSYE FIRDGESTPA LIWTPIARPA DSSTSSPAGP PALPVDPGNV VTPFVPELEA YPAIDRDDPD DYILISPIDS GLPNSYLLFK DPRSIPGVAS GYGEAVNGVW LGDKTRAEGA SIPAHIADQL RGRRFGNFDS LRKATWIAVA NDPELVKQFT QHNLEIMRDG GAPYPRLVDQ AGGRTKFEIH HKKHIANGGA VYDIDNLVIM TPRQHIDHHR SHENDL
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