Gene Psyr_0196 details

Gene Information

• Locus tag: Psyr_0196
• ID: 3365672
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. syringae B728a
• Kingdom: Bacteria
• Replicon accession: NC_007005
• Strand: -
• Start bp: 206567
• End bp: 209947
• Gene Length: 3381 bp
• Protein Length: 1126 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 637650539
• Product: hypothetical protein
• Protein accession: YP_233307
• Protein GI: 66043466

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.312925
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 17
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGACCGACA AATCCGGCAC CCATACTCAA CGACGTGCTG CAACGTTCGC CAAGACACCC 
GCCACGGCCA CCAGCCTGTG TCCCTTCCGC GGACCTGACA TCGCCATCGT GCCAGTGCGC 
TATGCGCTGG ACCGCTCCCG CTACGATGCC GCGCCCGAGA AGCTCAAGCC GCTGCTCAAG 
GGCAGCCGCT GGGCGGTGAT GCCGAAGCTG AAAACACGCA GCTATACCCT TCGCCAGCTG 
TATGACGGCT ATGTGTATGT CTATGACGAA ACGGCCGGGA CCTTTCATGA GTACTTCTCG 
TCAGCTGCCA ATGGTCATCT GAGCCGCATC ATCTGGACAG ACGCACAGAT CGGCAGTGAC 
CGGCGAAGCG GTGCCGACGA TGGCAAACCC TTCCTGCTCT ATCCGCGAAA CAACCGGCTT 
CACATCGCCT TTTCAGCGCA GCAGTGGACC TGGCGAATCT GCGAACACCT GCGCTCGAAT 
CCGGCAAGCC GCGCGTCATG GATGAAAGCG CTGGATCTGA AACGCTACTG CATGACCATG 
GCCGAGCCGG ATACCTTGCC GTTGAACCGC ATTGCCGAAG CGGTAGCGGA CATCGACAAG 
GAGCATGTGG TTGATGATGA CCGCTTTGCA GACTCGGCGA TTCCTACATC CAAGGCCTCC 
AGCGAGGAAG CCGATCCGCT GTTTTCGCCA ATCGGCGCTG ACGTTTTCTG GCAGGGCAGC 
GTTGAAGATC AGGACAGCTC CCTGCTCATC GCCCTTGATG ATCCACTGGC CATTTTCAAT 
GATCTGGGCA TGCAACTGGC CGCCGATCAG GCCGCTTACC GCAACTGGCA AGCCGAGCAC 
GAACACAAGA TCCAGATCGC CCAGACTGTC ACCGCACTGT GTGGCGCTGA AGGCGAACCA 
GAAAAATTGC CGGCATCAGT GCGCGGCAAT GCGGCGCTTA CCCACCAGTA CCTGAGCGAA 
GTCGAAGCTT ATTTTGAACA ATGCATGTTT GAACAAGAGC AGATCGGCAA CAACACCGCT 
CCCGGTGGCG TGCTATTGCT GCCGGATATT TTCAAAAGCC CGCAGATGCG CAGATCGCTT 
GAAATGCGTT ACGGCAGCGC GCCCTCCGAC GAGGCCCTGC AAGCCTGGAA AGATCGCCAC 
AAATGGCGGC GCGAGGTCGA TCTGAGCGGT GCGCGTCAGT ACCTTCAGCA GCACCTGCCA 
ACCGGTGACA CACTGCTGCA ACAGGTGCAA GACACGCAAA GCGACTTTCG GCAATGGTCG 
ACCCATCTGG GTACGGAACC GCTCAAGCTG TTTGTCGACA CCTCTCACCC TGAAAGCCTA 
CTTTATCTGC AAACGGTCAT GCTCAATCTG CAGATCATCT ACGCTCAGGA CAACGCCGCC 
AGCGCCTGGC TTGCCGAGCA GGAAGCCAAC GACAGCAGCC TGTTTGGCAC GTTGCGCTAC 
GGCTTCTCAC CGGCGCTCAA GCACGCGCTG CACCAGGAGG CCAACGCGCT GCTGAACGGC 
CTCGGCGACA TCACCAACCT GGCCACCCGC ATCGGCGAAC TCAACGGCAC GCTCAATCAC 
CAGGGCTTTG CCGACAAGCC GTGGATGAAG GCGCTGAAAC AACCCGTTCA GGACACCTTC 
AAGGCCCTCG GCCAACTGGC CAGCGATGCT GGCAAGGCAA CGTTCGAAAG TATCCTGCTG 
GCCTGGGTGC CCATCGACAG CCGCCTGGCA GTGGGCAAGC AGCAGAACAT CGTGGCACTG 
ATTCGCACAC TGTTGATTGG CCAGATTTTG CTCGATTCTA AGGCGCGTAT TGCGATCGAT 
CACAACATGC TCGCGAAGCT GAAAACCTGG ATCAGTGAGT GGCAGGTGCT CAACAAACAG 
ATCAGCGACA CCCGTCGCAG CTGGCTCTAC CCAACCGCTT ACAACCCCCG CAAAAGCATC 
GCCAGCCACC TGCGCGTGCT CGAGGAAAAA CTTCGCCTGC ACGAACTGAG CATGCCGGCC 
CTGCTCGACT TTCAGAACAA CCAATACGCC AGGCAGTTGC AGGACGAGAT TCGCCTGCAC 
GTCCAGTCCG GCAAAGCCAT CACCAAAGAG TGGCTGACCA GCGCCAGGCG CTGGCTCGAT 
GGACTGGGAG GCATTGCCGG CTCGATCACC TGGGGCGTGA TCATGCTCAA CTTCATCAAC 
ACCGCCTTCA CTTATCGCGA CCTTACTCGG GATGGAGACT TCAGTGCCAA GGACCTTGGC 
AAGGTGACGT ATGGATTGGG ATATAGCTTT AACTTGTTGA TGGCGGTATT TGTTGAAGCG 
CCGTGGGCGG TTATCAGGGA TGCGACGCCG GTGCTGATCG ATGGCAAGAA TGTGGGGATT 
CTGGATCGCT CTGCGGGTTA TTGGAGGGCG AAGGGAAATC TCGTATGGGG TGATGCCATA 
CGTGGGTTCA GGGTTTCGAT GGTGGCGATG GGGGCGTTTG GGGTAGCGGC GGCTGTTCTG 
GAAGTATTGG ATATTCAGGA TGATCTCAGC CGAGTCAATA CTTCCGAAGA GATCATAGCG 
ATGCAGCTAA AATTTGCGTC AGTGCTCATG ATGGGAGCAG GCAGTGCCAT TCAACTTATT 
GCAGGAATCT TCCCCACCAC ACCCCTTACT GCCGTCGCGA TGAGCCCATG GTTTAGTATA 
ACTTTACTGC TCATAGGTAC CGTGTACCTA TTCGCGACGA CGGCTCTGAA TTACTTTAAG 
CAGGACAGTG TAGGTTGGTG GCTGCGAAGA TGTTGCTGGT CCAGATCAAT TGAGTACCGG 
TACTCAACAG ACGCAGGAGG CCAGCACGCA GAAAAGCTTG ACCTTCTTAC AATACAATTA 
AGCCCTCAAG TTCATGTAAA AATCACCACA CGTCTTGAGA GTCGTTATCT TGGTAAAGGG 
GATTATTACA GCACAGCAGT GCAAGACGGT GCTGGCGTGC AGCTTCTTTT TCCGAGCGCG 
GTACGCGCGC AATCCGTACA TTTCAATATC ATCAGCAGCA AGCGCCCATG GGGAGTACTT 
CCCGTGGAAA AAATAGATTC TCCGATAAAT GAGTCATTTC TAAACCGAGG GCAGTTCAGG 
CAGGCTGGCC AGTTTGGAAC ACTTGGCAAC AAAGCGGCCC GCAATGCTCA CGAGGATTTC 
ACATTTCCGC TTATGCCCCA TGAAAGTGAA GACTTGATAT GGGAAACCTG GATTCCTCTT 
GAGGCAGAAG CCACATACCT AGAGCTGCAG ATATGGTACC CCGACAGCCT TATTAAACCC 
GACCAACAAG ACATCGGATA CTTGTATCAA CTTAAACTAA ATCGCGAGGG AGATACCAAG 
GTCGACGGCC TGATCACTGC TGAACTCGAA GTAAAAGCGC TAAACCGCAG CACTGCCTTG 
ACTCTCGAAG TAGCGGAATA A 

 

Protein sequence

MTDKSGTHTQ RRAATFAKTP ATATSLCPFR GPDIAIVPVR YALDRSRYDA APEKLKPLLK 
GSRWAVMPKL KTRSYTLRQL YDGYVYVYDE TAGTFHEYFS SAANGHLSRI IWTDAQIGSD 
RRSGADDGKP FLLYPRNNRL HIAFSAQQWT WRICEHLRSN PASRASWMKA LDLKRYCMTM 
AEPDTLPLNR IAEAVADIDK EHVVDDDRFA DSAIPTSKAS SEEADPLFSP IGADVFWQGS 
VEDQDSSLLI ALDDPLAIFN DLGMQLAADQ AAYRNWQAEH EHKIQIAQTV TALCGAEGEP 
EKLPASVRGN AALTHQYLSE VEAYFEQCMF EQEQIGNNTA PGGVLLLPDI FKSPQMRRSL 
EMRYGSAPSD EALQAWKDRH KWRREVDLSG ARQYLQQHLP TGDTLLQQVQ DTQSDFRQWS 
THLGTEPLKL FVDTSHPESL LYLQTVMLNL QIIYAQDNAA SAWLAEQEAN DSSLFGTLRY 
GFSPALKHAL HQEANALLNG LGDITNLATR IGELNGTLNH QGFADKPWMK ALKQPVQDTF 
KALGQLASDA GKATFESILL AWVPIDSRLA VGKQQNIVAL IRTLLIGQIL LDSKARIAID 
HNMLAKLKTW ISEWQVLNKQ ISDTRRSWLY PTAYNPRKSI ASHLRVLEEK LRLHELSMPA 
LLDFQNNQYA RQLQDEIRLH VQSGKAITKE WLTSARRWLD GLGGIAGSIT WGVIMLNFIN 
TAFTYRDLTR DGDFSAKDLG KVTYGLGYSF NLLMAVFVEA PWAVIRDATP VLIDGKNVGI 
LDRSAGYWRA KGNLVWGDAI RGFRVSMVAM GAFGVAAAVL EVLDIQDDLS RVNTSEEIIA 
MQLKFASVLM MGAGSAIQLI AGIFPTTPLT AVAMSPWFSI TLLLIGTVYL FATTALNYFK 
QDSVGWWLRR CCWSRSIEYR YSTDAGGQHA EKLDLLTIQL SPQVHVKITT RLESRYLGKG 
DYYSTAVQDG AGVQLLFPSA VRAQSVHFNI ISSKRPWGVL PVEKIDSPIN ESFLNRGQFR 
QAGQFGTLGN KAARNAHEDF TFPLMPHESE DLIWETWIPL EAEATYLELQ IWYPDSLIKP 
DQQDIGYLYQ LKLNREGDTK VDGLITAELE VKALNRSTAL TLEVAE