Gene Psyr_0151 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0151 
Symbol 
ID3365627 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp163915 
End bp165084 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content63% 
IMG OID637650494 
ProductFAD dependent oxidoreductase 
Protein accessionYP_233262 
Protein GI66043421 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0665] Glycine/D-amino acid oxidases (deaminating) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCAGC CAAAAGTGGA CGTACTAATT GTCGGCGGCG GCTTCATGGG CTCGGCATCA 
GCGTTCTTTC TGCGCCAGCG CGGCAAGTCA GTGACGCTGC TGGAGCGCGA CGTGATCGGC
CAGTACGCCA GCGGCGTGAA CTTCGGCAAC GTGCGCCGTC AGGGTCGGCA TCTCGGTCAG
CTGGAACTCG CCAACCGCTC CAGAGCCCTT TGGCAGCGGC TGCCGGAGCT GATCGGTGAA
GACCTGGAGT TCCTGCCCAG CGGCCACATG CGCGTCTGCT ATCGCGAGGA CGAAATCGCC
GAACTGGAAG CCTATGCAGC GGCACCGGAA GCCCGTGAGC TGGACCTGAA AATCTATAGC
GGGAAAGCGC TGCACGAGCG CTTTCCGTTT CTCGGGCCGG ACGTGAAGGG CGGCTCTTAC
GCGCCACACG ATGGCCACGC CAACCCGCGC CTGGCAGCAC CTGCCTTTGC CCGCGCAGCG
ATTCGGGCCG GGGCGCGGAT CGAAGAGCGT ACCGAAGTGG CTCATGTTGA AAAGGTCGGT
AACGAATTCG AAGTCACCAC CACTGACGGG CGCATTTTCA GCGCCGATCA GTTGCTGATT
ACCGCTGGCG CCTGGGGACA GAAACTCTCC ACGCAGTTTG GCGAATCCGT GCCGCTGGAC
ACCCATGGTC CGCAGATGGC CGTCACCGAG CCGGTGCCGT ATGCACTGCC GACAGTCATC
GGCGTGTTCA CCAAAATCCC TCACGAAGTG ATCTACTTCC GGCAGATCGC CCGCGGCAAC
ATCGTCATCG GCGGTGGTTT TCGCAGCAAG CCGGACATGA TCAACCGCCG CGCCTACGTC
GAACCGCGCA GCATCATCAA CCAGGTGCAG CAGATGCGTC GCCTGTTGCC CGGCGTCGGC
AACCTGAACA TCATCCGCGT GTGGAGCGGC ATCGAAGGCT ACACGCCGGA CTCGCTGCCG
GTGATGGGCC GCAGCGGCAA GGTCGACGGC CTGTTCTATG CGTTCGGCTT CTGCGGTCAC
GGCTTCCAGC TCGGCCCGGG CGTGGGCGAC GTGATGGCCG AACTGATCAG CACCGGCACC
ACCAGCACCT CGATCAGCCC GTTCGACATT CGCCGGTTTG ATGTCAGCCT TGTGGACAAC
CTCACTGAAC AGACGAGTAA AGCCTCATGA
 
Protein sequence
MKQPKVDVLI VGGGFMGSAS AFFLRQRGKS VTLLERDVIG QYASGVNFGN VRRQGRHLGQ 
LELANRSRAL WQRLPELIGE DLEFLPSGHM RVCYREDEIA ELEAYAAAPE ARELDLKIYS
GKALHERFPF LGPDVKGGSY APHDGHANPR LAAPAFARAA IRAGARIEER TEVAHVEKVG
NEFEVTTTDG RIFSADQLLI TAGAWGQKLS TQFGESVPLD THGPQMAVTE PVPYALPTVI
GVFTKIPHEV IYFRQIARGN IVIGGGFRSK PDMINRRAYV EPRSIINQVQ QMRRLLPGVG
NLNIIRVWSG IEGYTPDSLP VMGRSGKVDG LFYAFGFCGH GFQLGPGVGD VMAELISTGT
TSTSISPFDI RRFDVSLVDN LTEQTSKAS