Gene Psyr_0064 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_0064 
Symbol 
ID3365539 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp63388 
End bp64470 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content59% 
IMG OID637650407 
Producthistidine kinase internal region 
Protein accessionYP_233176 
Protein GI66043335 
COG category[T] Signal transduction mechanisms 
COG ID[COG2972] Predicted signal transduction protein with a C-terminal ATPase domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAATCG AACCTGTGAA ACACGACGCC CGGCCCGCGC CCGGCAAAGA CTTTTTCCTC 
CCTGAACTGT GCCTGCCGCA GGCATTGCTG GTGCTCGTCG TGCTGGCGGA GCTGCTGGTG
CTGGTTCTGG TGCTGGTGGA ACCGATGCGC AGCGGCTTCG ACTGGGTACG CCTGGCGTTG
ATGTCGCTGT TCGTGCAATG GATCGTGCTA CTGTCCGCGG CGCTGCTGTG CGGCTTGCGG
CCCTGGCTGG CGCGATTGAC GCCGGGGCTG GCAGGCATGC TCAGTTGCCT TCTGGTGGTC
GGCCTGACGC TGTTGTGCAC AGCCGTCACC GATGTCTGTC AGCTTACCGG GCGGATTTCG
GTCAGCGGCA TGGTCGAGCG TTATCTGCGC TACTCGACGA TTGCCCTGAT CATGTCGGCC
CTGATGCTGC GCTATTTCTA TCTGCAGAGT CAGTGGCGCA AGCAGCAACA GGGCGAACTG
CGCGCCAGAA TCGAATCGCT GCAAGCGCGC ATCCGCCCGC ATTTCCTCTT CAACACACTC
AACAGTATCG CCAGTCTGGT GGCCAGCAAC CCGGTCAAGG CCGAGCAGGC GGTGCTCGAT
CTTTCGGACC TGTTTCGCGC CAGTCTGGCC AAGCCGGGCA GCCTGGTGAC ATGGGGTGAA
GAGCTGGCAT TGGCAAAACG ATATTTATCG ATTGAGCAAT ATCGTCTTGG CGAGCGTCTA
CAGTTGGACT GGAGGGTGAG CGCAATTCCC GATGACTTGC CAATCCCCCA GCTAACCTTG
CAGCCATTAC TTGAAAACGC TTTGATTTAT GGCATTGCTC CGCGGGTCGA AGGGGGCGTT
GTAACAGTCG AAGCGAACTA TGAAGGGGGA GAGTTCATAT TGAGCGTCAG CAATCCCTAT
GAAGAAGTTG CCAATCGGCA GACTTCCAAC GGTACTCAGC AAGCTCTGAC GAATATAGGC
GCACGAATTG CGGCACTTTT TGGCCCGCAC GCCAGTCTGA GCGTGGAGCG CCGTGACGGT
CGTCACTACA CCTGTCTACG CTATCCTTGT GCGAGACTCA CGCAGGAAGC CAGAGCTATA
TGA
 
Protein sequence
MRIEPVKHDA RPAPGKDFFL PELCLPQALL VLVVLAELLV LVLVLVEPMR SGFDWVRLAL 
MSLFVQWIVL LSAALLCGLR PWLARLTPGL AGMLSCLLVV GLTLLCTAVT DVCQLTGRIS
VSGMVERYLR YSTIALIMSA LMLRYFYLQS QWRKQQQGEL RARIESLQAR IRPHFLFNTL
NSIASLVASN PVKAEQAVLD LSDLFRASLA KPGSLVTWGE ELALAKRYLS IEQYRLGERL
QLDWRVSAIP DDLPIPQLTL QPLLENALIY GIAPRVEGGV VTVEANYEGG EFILSVSNPY
EEVANRQTSN GTQQALTNIG ARIAALFGPH ASLSVERRDG RHYTCLRYPC ARLTQEARAI