Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_2138 |
Symbol | |
ID | 3516126 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | - |
Start bp | 2640011 |
End bp | 2641585 |
Gene Length | 1575 bp |
Protein Length | 524 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637670854 |
Product | hypothetical protein |
Protein accession | YP_265419 |
Protein GI | 71066692 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0103709 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGACAAA CCAGCACTGC GCCAAGAAAC AATAAACTTA AACCGTCAAG CAACCTTATC ATGAATGGTA GCGTTCGCGT TCGCGTCATT CGCACCTTAC TGGCGATTCA GAATGGCCAA TCGCTAGCAA GCGTCCTTGA TCCGCTACTA AACAGTTTGC ATGACGGCGA TAAAGGTTTT GCCCATGCAT TATTGCTAAC AACGTTGCGT CAATGGTACG CCCTTGAGCG CTTACTGGAT AGTCTGGCTG ATAACTCCAT TGATGAAAAA GAAGTACGTA CTACTATTCA AGTGGGTTTG ACGCAGCTGC TCTATTTGCA AGTAGCTGAT CATGCGGCGA TTCATGAAAC GGTTGAGGCG GCAAAAGAAA TTGAGTTTGC TCATGCAACT GGTTTAATCA ATGCCATCTT ACGTAAAGTT GCTAAAAACC CAAGTAAGTT CCGCAAGAAG TGCGATAAAA AACACAGCTT ACCTAATTGG CTTGCTTATC AGCTTAAGCA AGATTGGAGT GAGCAGTATG ACGATCTGAT GCAGGGATTA CGTCAACCTG CGCCGATGTT TTTACGCGTG AATACAGCGG TTACCTCGGT AGAGGACTAT CAGCAAGCAT TGGTGGAGTT TGAGGTTGAA GCGGACTTGG TTGAGCTAAC GAGTGGTTTT AACTTACCCA ACTCGCTGGA TGCAGCCACA TCTAAAACCA TATCAACCAA AGGCTTCAGA TTACATCAAA GCACCGCAGT GAATGCCTTA CCTCAATTTG CTCAAGGGGC TGCTAGTGTA CAAGATATGC ATGCTCAGCT TGCAGCGCCG CTTATCCATA GCGCTCTATT CAATAAGCTG AGTGTTAAAA ACGATGATGC AGATGTCGAT ACAGACACGA ATAACAACGA GATCCGTATT TTAGATGCTT GTGCAGCGCC GGGTGGTAAG CTTGCTCATT GGTTAGAAAT ACTTAGCTCA AACGAGCAAT CACCTTTGTT TCACGTGAAA CAAGATGATG AATCAATACC TGCGGTTTCG AAAGTGACGC TTACTGCGAT TGATAATGAA GCGCCGCGTA TCGAGCGTAT TTACGATAAT TTACAGCGCT TGAACTTAAG TCAGCACGAC TTGCAGCAAG CTGAGAAAAA TATCGAACTC AATATTGTCT GTGCTGACGC GACGACATGG CAAGGGGCCG GTAAGAAAAA GAGCAAACTT GTATTTGACG CTATATTACT AGACTCACCT TGTACGGCGA CTGGCGTGAT TCGTCGTCAT CCTGATATCA GTATCTTACG TACTGAAGAG GATGTGGAGC AAACGGCATT GTTACAAGCC GATATCTTGC ACAATCTATG GCCACAACTT AAGGTTGGCG GCTATCTATT ATATGTCACT TGCTCTATCT TAAAGCAAGA GAACGTCGAG CAAATGCAGG ATTTCATCAC TCACTATAGC GATGCGGTAG CCATTGAATT TAGCGAAGAT TGCAATTGGG GTATCGCCCA AGCCATCGGT CGTCAGTGCT TACCAATTGA TAGCGAGAGC GGCGATGGTT TTTACTATGC CTTGCTGCAC AAAACTGCTG AATAA
|
Protein sequence | MRQTSTAPRN NKLKPSSNLI MNGSVRVRVI RTLLAIQNGQ SLASVLDPLL NSLHDGDKGF AHALLLTTLR QWYALERLLD SLADNSIDEK EVRTTIQVGL TQLLYLQVAD HAAIHETVEA AKEIEFAHAT GLINAILRKV AKNPSKFRKK CDKKHSLPNW LAYQLKQDWS EQYDDLMQGL RQPAPMFLRV NTAVTSVEDY QQALVEFEVE ADLVELTSGF NLPNSLDAAT SKTISTKGFR LHQSTAVNAL PQFAQGAASV QDMHAQLAAP LIHSALFNKL SVKNDDADVD TDTNNNEIRI LDACAAPGGK LAHWLEILSS NEQSPLFHVK QDDESIPAVS KVTLTAIDNE APRIERIYDN LQRLNLSQHD LQQAEKNIEL NIVCADATTW QGAGKKKSKL VFDAILLDSP CTATGVIRRH PDISILRTEE DVEQTALLQA DILHNLWPQL KVGGYLLYVT CSILKQENVE QMQDFITHYS DAVAIEFSED CNWGIAQAIG RQCLPIDSES GDGFYYALLH KTAE
|
| |