Gene Psyc_1920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_1920 
Symbol 
ID3515890 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp2368788 
End bp2369465 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content45% 
IMG OID637670618 
Producthypothetical protein 
Protein accessionYP_265202 
Protein GI71066475 
COG category[R] General function prediction only 
COG ID[COG1611] Predicted Rossmann fold nucleotide-binding protein 
TIGRFAM ID[TIGR00725] conserved hypothetical protein, DprA/Smf-related, family 1
[TIGR00730] conserved hypothetical protein, DprA/Smf-related, family 2 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00341643 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAAATGA AAATTAATAA TGACATGTAT GAAGTGATTA CCAGTCAAGA CATTACCAAT 
ATTGAAAAAG CAGTGGATAA ATCAGCGTTA ACCATGCCGC TAGTGGCAGT CTATTGTGGG
TCGCGTTTGG GTAATGATGT CGTATATGAG CAAGCCGCGC GCGAGCTGGG TATGGCGCTA
GCAGACAATG GCATGGGCTT GGTATATGGC GGCGCGAGTA TCGGGCTGAT GGGCGCAGTC
GCCGATGAGG TGATTCGAGG CGGCGCAGAA GCAGTCGGTG TGATTCCAAC TTTTATGCTC
AAGCACGAAA TTGCTCATGA GCAGCTGACC CGTCTACATT TAACCGATAC GATGCACACA
CGCAAAACGG TGATGGCAGA ATATGCTGAT GCGTTTATTA CCTTACCGGG CGGGCTTGGC
ACCTTAGAAG AAATCATGGA AATTGCCACT TGGCGCCAGC TGTATCAACA TGAAAAACCA
ATGATTATTT TGAATATCAA TGGTTTTTAT GATCGTATGA TTGAGCATTT AAAATATACC
ACTGAGCAAG GCTTTATGAA GCAAGAAGAT CTTGAGCGCT TGGTAGTGTG TAATACTATT
AATGATGCCA TTGATTTACT ACAGACCATG GTCAAAATAG ATGCCGCTGT CAATACGGAA
AAGATGGCTG GCAACTAA
 
Protein sequence
MQMKINNDMY EVITSQDITN IEKAVDKSAL TMPLVAVYCG SRLGNDVVYE QAARELGMAL 
ADNGMGLVYG GASIGLMGAV ADEVIRGGAE AVGVIPTFML KHEIAHEQLT RLHLTDTMHT
RKTVMAEYAD AFITLPGGLG TLEEIMEIAT WRQLYQHEKP MIILNINGFY DRMIEHLKYT
TEQGFMKQED LERLVVCNTI NDAIDLLQTM VKIDAAVNTE KMAGN