| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_1575 |
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| Symbol | |
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| ID | 3515539 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter arcticus 273-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007204 |
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| Strand | + |
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| Start bp | 1927044 |
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| End bp | 1928390 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637670267 |
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| Product | RND membrane fusion protein AcrA |
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| Protein accession | YP_264857 |
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| Protein GI | 71066130 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.853878 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCACT CTTATCTTGC GCTTGTAATA GCAACTGTAC TATCTGGAGC TGTACTGGTT
GGCTGTGACA AAAAAGAGGA TGCCGCTGGC GACGCGGCGG CGGCACAGCA ACAAATGCCA
CCCTCCGTCG TCAACGTTCA GACTGTTACT TTTGATACCG TACCACAAGT ACAGATTTTT
GCTGGACGCA CAGCGGCTTA TCAAACCGCT GATGTCCGCC CACAGGTGAG CGGAATTATC
GACGAAGTGT TGTTCCGTGA GGGCAGCAAC GTCAAAAAAG GTCAACCTTT ATATCGCATC
AATACGGATA ACTACGCAAC GTCTATTACC AGTGGTCAGG CGGCGATAGC ACAAGCAGAA
GCCAACTATC AGACAGCATT GGCTAATAAT GCCAATGCAA AAGCGGATTT GGCCAGCCGT
CAAGCATCTC TATCACAAGC ACAAAATGAC TTGCAACGTC TGCAAGGTTT GGTTGCTATT
GATGCCATCT CAAAGCAGCA GTACGACCAA GCACAAACCA CCGTGCGTAC GGCGCAAGCC
GCCGTCCAAA GCGCCAATGC GGCTATCAGT CAATCACAAG CAGGTATTGA GAGTGCAAAA
GCTGGTATTC AGACAGCAAA AGCTGGCTTG CAAGCGAGTA CCTTAGATCT AAATCGTACC
ATCGTGCGTG CTCCTATATC AGGTCGTACA GATCGCTCTA GCGTGACTGC TGGTACATTG
GTCAGCTCAG GTCAACCTAC TCCTTTAGTG ACCATCTCAC GCCTAGATCC TATCTATGTC
GATATCAGTC AATCATCCTC TGAGCTGCTT AAATTGCGTC AGCAGATATC TGCAGGCAAA
GCGCAAGCAG GAATGAACTC AGTTGAATTG GTGTTAGAGG ACGGTTCAAC CTATCCTGTA
CGTGGCGAAT TAGCATTGTC AGAAGCGAAA GTTGATGAAT CAACAGGTGC AGTGACATTA
CGTGCAGTCT TCCCGAATAA TAGCAATATC TTATTACCCG GTATGTATGT CAGCGCCCGC
TTAACTCAAA GCGTGATCAC CAATGCGGCA CTCGTCCCAC AAAGCGCCGT GATGCGCTCG
ACCAAAAGCG AGACGCAAGT TTATATCGTT GATGAAAACA ATAAAATCCA AGTTCGTCCG
GTCACGATTA ATGGCACATA TCAAGGACAA TGGGTGGTCA CTGACGGTCT TCAAGCTGGC
GACAAAGTAG TGATTATCGG TGGTGCAAAA GTGAAGCCTG AACAAGAGGT TATTGCGAAG
CCATTAGAAA ATCCAAACCC TGCGCCTGCT GCCAAAAAGG CTGCTGCCAA AACACCGCAG
CAAGCTGCAC AATCAGCCGC CAAATAA
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| Protein sequence | MKHSYLALVI ATVLSGAVLV GCDKKEDAAG DAAAAQQQMP PSVVNVQTVT FDTVPQVQIF
AGRTAAYQTA DVRPQVSGII DEVLFREGSN VKKGQPLYRI NTDNYATSIT SGQAAIAQAE
ANYQTALANN ANAKADLASR QASLSQAQND LQRLQGLVAI DAISKQQYDQ AQTTVRTAQA
AVQSANAAIS QSQAGIESAK AGIQTAKAGL QASTLDLNRT IVRAPISGRT DRSSVTAGTL
VSSGQPTPLV TISRLDPIYV DISQSSSELL KLRQQISAGK AQAGMNSVEL VLEDGSTYPV
RGELALSEAK VDESTGAVTL RAVFPNNSNI LLPGMYVSAR LTQSVITNAA LVPQSAVMRS
TKSETQVYIV DENNKIQVRP VTINGTYQGQ WVVTDGLQAG DKVVIIGGAK VKPEQEVIAK
PLENPNPAPA AKKAAAKTPQ QAAQSAAK
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