Gene Psyc_1275 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_1275 
Symbol 
ID3515232 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp1536166 
End bp1537587 
Gene Length1422 bp 
Protein Length473 aa 
Translation table11 
GC content42% 
IMG OID637669963 
Producthypothetical protein 
Protein accessionYP_264559 
Protein GI71065832 
COG category[R] General function prediction only 
COG ID[COG1253] Hemolysins and related proteins containing CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0255228 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCTCAT TTATATATCA AAAATCCAGA CCATATCAGA TAATATTTTC TATCTGCTTG 
CCTCTGCTCA TGATATATTG TGACTTCTTT TTACTTCCTT TTTCTTCTTT ATTTAGGTTA
CCTAACTTGT TCACCTCTTT TGTGTCTGTA CCTCGTTTAC ATCGTTCGCG TGCTTGTCGT
AAAGACGCCT CTGCCAAACC TCCCCCGACG ATGCGTGGCG ATACTCGCTT GAGTATCAAA
TCATTGTTGG CGTTATCTGT ATGGATAACA CTGCTGCTAC CGCAAACGGT TTGGGCAGCT
GAAGGAGTAG CGGACCCAAG TACAAGCAGC GTATTGCTGC TCATACTATA TGTAGTAGTT
GCCATTGGTA TCTCATTTAT CTGTTCACTG GCAGAGTCAG CACTCCTGAC GATGACGCCG
TCTTATATCG CTGATGTTCA AGAGCGCAAT CCCAAAAAAG CCCATATGCT AAGACGCCTA
AAGATTGATA ATATCGATCA ATCCTTGGCT GCTATTTTGA CCCTGAATAC AGTGGCACAT
ACATTTGGCT CGATAGGCGC GGGTGCACAA GCAACGATTG TATTTGGTAG TGCTTGGTTT
GGTCTGTTTT CTGCCATTAT GACCCTTGCA ATTTTATTCT TATCTGAAAT TATTCCAAAA
ACCCTGGGTA CGATGTACTG GCGTCAACTC AGCGGCATGG TTGCCTACTT TGTACGTGGT
ATTATTTTAC TTCTATATCC CTTAATCTGG ATTTCAGAAA AACTCACTAA GCTGCTAGTA
CGTGGCAAAG AACCACAAAC CTTTAGTCGT CGTGAGTTTG CAGCGCTTGC CAGTATTGGT
GAAGAAGCGG GACAAATCGA CCCATTGGAA TCGCGTATCA TCCGCAACCT GCTGGCATTT
GGTGCTATTA AAGTTGAAGA TATTATGACG CCGCGCTCAG TGATGTTGGC TTTTGAAGAA
AATAAAACCG TTGCAGAGTT ACTGGTCGAT CGACCAAAAC TGACCTTCTC AAGATTACCG
ATTTATGATG GCGATTTGGA TAATATTACA GGCTTTGTAT TAAAAACAGA CATGCTATTG
GCAAAGGTTA ATCATGCTGT CGATAGACCA TTGACGCAGT TTAAACGTGA CATCACCTTC
GTATTTTCAA AGATGAAATT GTTTGATTTG CTCGAGCTAA TGCTTAAAAA TCGCATCCAT
ATTGCCATTA CAGTCGGTGA ATACGGGGAA GTCAAAGGCT TAGTCACTCT AGAAGATGTG
TTCGAAACAC TCTTAGGTCT TGAAATTGTC GATGAGATAG ACCGTGTTGA AGACATGCAG
GCATTAGCAC GGCAAATGAT GGACAGACGT ATCGAGCGTT TGGGTATGAA GCTGAGCGAT
GATGAGCATT ATGAAGACTA TACGGTAGAT AATAAGCAGT AA
 
Protein sequence
MCSFIYQKSR PYQIIFSICL PLLMIYCDFF LLPFSSLFRL PNLFTSFVSV PRLHRSRACR 
KDASAKPPPT MRGDTRLSIK SLLALSVWIT LLLPQTVWAA EGVADPSTSS VLLLILYVVV
AIGISFICSL AESALLTMTP SYIADVQERN PKKAHMLRRL KIDNIDQSLA AILTLNTVAH
TFGSIGAGAQ ATIVFGSAWF GLFSAIMTLA ILFLSEIIPK TLGTMYWRQL SGMVAYFVRG
IILLLYPLIW ISEKLTKLLV RGKEPQTFSR REFAALASIG EEAGQIDPLE SRIIRNLLAF
GAIKVEDIMT PRSVMLAFEE NKTVAELLVD RPKLTFSRLP IYDGDLDNIT GFVLKTDMLL
AKVNHAVDRP LTQFKRDITF VFSKMKLFDL LELMLKNRIH IAITVGEYGE VKGLVTLEDV
FETLLGLEIV DEIDRVEDMQ ALARQMMDRR IERLGMKLSD DEHYEDYTVD NKQ