Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_1275 |
Symbol | |
ID | 3515232 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | - |
Start bp | 1536166 |
End bp | 1537587 |
Gene Length | 1422 bp |
Protein Length | 473 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637669963 |
Product | hypothetical protein |
Protein accession | YP_264559 |
Protein GI | 71065832 |
COG category | [R] General function prediction only |
COG ID | [COG1253] Hemolysins and related proteins containing CBS domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0255228 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGCTCAT TTATATATCA AAAATCCAGA CCATATCAGA TAATATTTTC TATCTGCTTG CCTCTGCTCA TGATATATTG TGACTTCTTT TTACTTCCTT TTTCTTCTTT ATTTAGGTTA CCTAACTTGT TCACCTCTTT TGTGTCTGTA CCTCGTTTAC ATCGTTCGCG TGCTTGTCGT AAAGACGCCT CTGCCAAACC TCCCCCGACG ATGCGTGGCG ATACTCGCTT GAGTATCAAA TCATTGTTGG CGTTATCTGT ATGGATAACA CTGCTGCTAC CGCAAACGGT TTGGGCAGCT GAAGGAGTAG CGGACCCAAG TACAAGCAGC GTATTGCTGC TCATACTATA TGTAGTAGTT GCCATTGGTA TCTCATTTAT CTGTTCACTG GCAGAGTCAG CACTCCTGAC GATGACGCCG TCTTATATCG CTGATGTTCA AGAGCGCAAT CCCAAAAAAG CCCATATGCT AAGACGCCTA AAGATTGATA ATATCGATCA ATCCTTGGCT GCTATTTTGA CCCTGAATAC AGTGGCACAT ACATTTGGCT CGATAGGCGC GGGTGCACAA GCAACGATTG TATTTGGTAG TGCTTGGTTT GGTCTGTTTT CTGCCATTAT GACCCTTGCA ATTTTATTCT TATCTGAAAT TATTCCAAAA ACCCTGGGTA CGATGTACTG GCGTCAACTC AGCGGCATGG TTGCCTACTT TGTACGTGGT ATTATTTTAC TTCTATATCC CTTAATCTGG ATTTCAGAAA AACTCACTAA GCTGCTAGTA CGTGGCAAAG AACCACAAAC CTTTAGTCGT CGTGAGTTTG CAGCGCTTGC CAGTATTGGT GAAGAAGCGG GACAAATCGA CCCATTGGAA TCGCGTATCA TCCGCAACCT GCTGGCATTT GGTGCTATTA AAGTTGAAGA TATTATGACG CCGCGCTCAG TGATGTTGGC TTTTGAAGAA AATAAAACCG TTGCAGAGTT ACTGGTCGAT CGACCAAAAC TGACCTTCTC AAGATTACCG ATTTATGATG GCGATTTGGA TAATATTACA GGCTTTGTAT TAAAAACAGA CATGCTATTG GCAAAGGTTA ATCATGCTGT CGATAGACCA TTGACGCAGT TTAAACGTGA CATCACCTTC GTATTTTCAA AGATGAAATT GTTTGATTTG CTCGAGCTAA TGCTTAAAAA TCGCATCCAT ATTGCCATTA CAGTCGGTGA ATACGGGGAA GTCAAAGGCT TAGTCACTCT AGAAGATGTG TTCGAAACAC TCTTAGGTCT TGAAATTGTC GATGAGATAG ACCGTGTTGA AGACATGCAG GCATTAGCAC GGCAAATGAT GGACAGACGT ATCGAGCGTT TGGGTATGAA GCTGAGCGAT GATGAGCATT ATGAAGACTA TACGGTAGAT AATAAGCAGT AA
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Protein sequence | MCSFIYQKSR PYQIIFSICL PLLMIYCDFF LLPFSSLFRL PNLFTSFVSV PRLHRSRACR KDASAKPPPT MRGDTRLSIK SLLALSVWIT LLLPQTVWAA EGVADPSTSS VLLLILYVVV AIGISFICSL AESALLTMTP SYIADVQERN PKKAHMLRRL KIDNIDQSLA AILTLNTVAH TFGSIGAGAQ ATIVFGSAWF GLFSAIMTLA ILFLSEIIPK TLGTMYWRQL SGMVAYFVRG IILLLYPLIW ISEKLTKLLV RGKEPQTFSR REFAALASIG EEAGQIDPLE SRIIRNLLAF GAIKVEDIMT PRSVMLAFEE NKTVAELLVD RPKLTFSRLP IYDGDLDNIT GFVLKTDMLL AKVNHAVDRP LTQFKRDITF VFSKMKLFDL LELMLKNRIH IAITVGEYGE VKGLVTLEDV FETLLGLEIV DEIDRVEDMQ ALARQMMDRR IERLGMKLSD DEHYEDYTVD NKQ
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