Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_1222 |
Symbol | spoU |
ID | 3515179 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | - |
Start bp | 1464855 |
End bp | 1465415 |
Gene Length | 561 bp |
Protein Length | 186 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637669910 |
Product | tRNA/rRNA methyltransferase |
Protein accession | YP_264506 |
Protein GI | 71065779 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0219] Predicted rRNA methylase (SpoU class) |
TIGRFAM ID | [TIGR00185] rRNA methylase, putative, group 2 |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00000000181503 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0200658 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCATTC ATATCGTGCT GGTAGCGCCA AAAATGCCCA GTAACACGGG CAATATCATT CGTCTGTGTG CCAATAGTGG GGCGCAGCTG CATTTGGTCA AACCGTTAGG GTTTGAGCTG GATGATAAAA AATTGCGCCG TGCAGGATTG GATTATCATG AGTATGCCCA TCTGCAAGTA CACGATGATT GGTCGGTGGC AAAACAAGCA TTGCAAGATG CTGATTGTCA TACCATCACG GCATTGACGA CCAAATTAAG CAAACCCTTT TATGATTATG ATTTTGGCGG GCAAGAGACT GCAGAGTCGG GCAGTGAGTT TTCTGGAAAT AACGTAGCCA TGGTTTTTGG CTCAGAAACG GCGGGATTGG CAGATGATAT TCGTGAAGAT ATTGGCGCTG ATAACTGGCT GCGACTACCG ATGCTGGCAG ATTCGCGCAG TTTGAATCTC TCTAATAGCG TGGCAATATG CTTATATGAG GTGTGGCGAC AACAAGGCTT TAGCGGTGAT GAAGGTCGCA GTATCGGCTA TGAGACACTG ACTGTCTACG ACCCTAAATA G
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Protein sequence | MTIHIVLVAP KMPSNTGNII RLCANSGAQL HLVKPLGFEL DDKKLRRAGL DYHEYAHLQV HDDWSVAKQA LQDADCHTIT ALTTKLSKPF YDYDFGGQET AESGSEFSGN NVAMVFGSET AGLADDIRED IGADNWLRLP MLADSRSLNL SNSVAICLYE VWRQQGFSGD EGRSIGYETL TVYDPK
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