| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_1120 |
|---|
| Symbol | |
|---|
| ID | 3514818 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter arcticus 273-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007204 |
|---|
| Strand | + |
|---|
| Start bp | 1334137 |
|---|
| End bp | 1335711 |
|---|
| Gene Length | 1575 bp |
|---|
| Protein Length | 524 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637669808 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_264405 |
|---|
| Protein GI | 71065678 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.475499 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATAATG ACAATAACAA TCAGGGCAAT AATCAGCTGC ATAGCCAACA AATAGTCACA
CCAGCAACTA CATCCACCAA GCAGCCATCA AGTGAGCCAG AAGAGCGCCG CTCTATAACA
AAAAAAACCA TTGCCATTGG TGAAGCACTG AAATTGGCTG TTGTTGGGCA TACCAATACC
GGTAAGACAT CTATACTACG TACCCTATTA CGTGACGTCT ATTTTGGTGA AGTAAGAGAC
GAAGCGGCGA CTACCCGTCA TGTGGAGCGT GCTCAGCTGA CTGACAGCCA AACTGGTGAA
GTGTTGGTCT CGCTATATGA CACGCCAGGT TTGGAGGACG CCTCTGGACT GATGGATTGG
CTGGAAGACA ATACCGCCAG TCGCCGTGAT GGTATTGAGC GCTTGCAGCA ATTTTTGGCA
GCAGATATCG CCTCCAGTGA TACTAATAAC AGTGGACTTA ATAGTAACTA CGATGATTAT
AGTCAAGAAG CAAAAGTTAT CCGTCAGCTG CTAGCAAGTG ATATGGCTAT TTATGTTGTA
GATGCACGCG AGCCGGTACT AGCTAAATAT AGAGATGAGC TGGCTATTTT GTCTTGGGCT
GCGATTCCCG TCATGCCTGT ATTTAACTTT ACAGACGCGC AAGATGCCAA TATCGATGAG
TGGCAAACGA TGCTGGCGCG GCGTAACTTG CATATTTCCA CTCGTTTTGA TTCTGTTGCA
TTTGAATTTA ACGATGAGAT GCGTCTATGG CAAAATCTTG CGACCATGCT CACCCACTCT
GAAATGCTTG AGCAGTTGAT GGCGCGCCGC ACTGAAAACT GGGCGCAGAT ATATGATGAG
GCTAATATCA TCATTGCGGA TTTTTTGTTA AACGTTGCAG CATTTGTACG GGAGATTGGC
GAAGATGATG ATCCTATGCC GGTATTACAG CAAATGCAAG AAGCGGTCAG ACAGAGCGAA
CGCGCTATGC AGCACAACTT ACTGAATTTA TATAAGTTTT ATGATAATGC CGTAGCGGCA
ACGCCACTTG AGCTACAAGC TTATCAGCAA GATCCATTTG ACCCTGAACT GCTAAAAAGC
TATGGCATTC GTACCACTTC TGGGGCGGCG GCTGGCGCGT TACTAGGGTT AGGTATTGAT
GCGGCAGCAC TTGGTACCAC CTTAGGATTG GGCGCTGCTA TAGGTGGTAT CGCAGGTGGA
TTGCTATCTA ATACTGGTAG TATCGCTGAT AAGATATCAG GGGTTAAGCG GTTATATATC
GACCCTGCAA CTTTAACCTT ATTGGCGACT CGGGCGATTG ACTTGTTGAA TGCGCTACGC
CATCGAGGTC ATGCGGCAAC AGATGCCACG CAGTTGATAT ATAATGGCGA GGCGTCTGGC
GACAATAATG ATGAAAATAG TCATGCCATA ACGCCATGGG CAACGCACAA ATTGCCAAGC
GAGCTCAAAA AAGCCCGAGG CAAACCACAA TGGTCGTCAC TCAGTAGCGG CAAGTCCGAG
CAAGCGCAGC TATTACGAGC AGATATGGCA TGGTCGCTGG CAAGCAGGCT GTCGTCGTAT
CAGCGTCAAC CATGA
|
|---|
| Protein sequence | MNNDNNNQGN NQLHSQQIVT PATTSTKQPS SEPEERRSIT KKTIAIGEAL KLAVVGHTNT
GKTSILRTLL RDVYFGEVRD EAATTRHVER AQLTDSQTGE VLVSLYDTPG LEDASGLMDW
LEDNTASRRD GIERLQQFLA ADIASSDTNN SGLNSNYDDY SQEAKVIRQL LASDMAIYVV
DAREPVLAKY RDELAILSWA AIPVMPVFNF TDAQDANIDE WQTMLARRNL HISTRFDSVA
FEFNDEMRLW QNLATMLTHS EMLEQLMARR TENWAQIYDE ANIIIADFLL NVAAFVREIG
EDDDPMPVLQ QMQEAVRQSE RAMQHNLLNL YKFYDNAVAA TPLELQAYQQ DPFDPELLKS
YGIRTTSGAA AGALLGLGID AAALGTTLGL GAAIGGIAGG LLSNTGSIAD KISGVKRLYI
DPATLTLLAT RAIDLLNALR HRGHAATDAT QLIYNGEASG DNNDENSHAI TPWATHKLPS
ELKKARGKPQ WSSLSSGKSE QAQLLRADMA WSLASRLSSY QRQP
|
|---|
| |