Gene Psyc_1046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_1046 
Symbol 
ID3514932 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp1238200 
End bp1238895 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content47% 
IMG OID637669736 
Productputative transmembrane protein of unknown function 
Protein accessionYP_264333 
Protein GI71065606 
COG category[S] Function unknown 
COG ID[COG3619] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.650406 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAACCA GATTGCCAAG ATGGATATTT TGGGGCGGAG CAGTACTGGC ATTTAGTGCA 
GGCTGCGTTA ATACGGCAGC CTTGATGGGA TTTACCAATT TATCGGTCTC TCATGTCACG
GGTAACGTCA GCCTATTTGC AGCAGCGATT GCGTATTTGG ATGCTCGCAG TATTTTGTAT
ATCGGCGCGC TGTTATTGTC TTTTTTGGCA GGGGCAATTT TGAGTGGCTT TGTCATCGGT
CAGACGTCAT TGAAGCTTGG TCGGCGTTAT GGCAGTGCGC TTTATATGGA AGCGGCATTG
TTATTGCTGA GCTATTGGTT ATACCAGCAG CATGATTATT TAGGACAGCT TGCCGCCGCT
ATGGCATGCG GCTTACAAAA CGCGATGGTT GCGACATATA GCGGGGCAGT TATTCGTACC
ACGCATTTAA CAGGGCTAAC TTCAGATATG GGCGCTGCCA TCGGTAATTG GCTCGCTGGT
CGGCGCATCA GTAAACCGAC ATTAGGGTTT CAGGCAATTA TTTGGTACTG CTTTTGCGCT
GGTAGTGCCG TAGGCGCTTT TTTATATGCC AGAGTGGGCT ATGGCGCTTT GTTTTTGCCC
ATTACTATTG TTTTGAGCGC AGCGTTCGTA TACAACTATG TGTCAGACAA TCTACCAGAA
AAAAGACAGC CAAGAAAAAA ACGCCCATCA GTTTGA
 
Protein sequence
MITRLPRWIF WGGAVLAFSA GCVNTAALMG FTNLSVSHVT GNVSLFAAAI AYLDARSILY 
IGALLLSFLA GAILSGFVIG QTSLKLGRRY GSALYMEAAL LLLSYWLYQQ HDYLGQLAAA
MACGLQNAMV ATYSGAVIRT THLTGLTSDM GAAIGNWLAG RRISKPTLGF QAIIWYCFCA
GSAVGAFLYA RVGYGALFLP ITIVLSAAFV YNYVSDNLPE KRQPRKKRPS V