Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_1046 |
Symbol | |
ID | 3514932 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | + |
Start bp | 1238200 |
End bp | 1238895 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637669736 |
Product | putative transmembrane protein of unknown function |
Protein accession | YP_264333 |
Protein GI | 71065606 |
COG category | [S] Function unknown |
COG ID | [COG3619] Predicted membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.650406 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATAACCA GATTGCCAAG ATGGATATTT TGGGGCGGAG CAGTACTGGC ATTTAGTGCA GGCTGCGTTA ATACGGCAGC CTTGATGGGA TTTACCAATT TATCGGTCTC TCATGTCACG GGTAACGTCA GCCTATTTGC AGCAGCGATT GCGTATTTGG ATGCTCGCAG TATTTTGTAT ATCGGCGCGC TGTTATTGTC TTTTTTGGCA GGGGCAATTT TGAGTGGCTT TGTCATCGGT CAGACGTCAT TGAAGCTTGG TCGGCGTTAT GGCAGTGCGC TTTATATGGA AGCGGCATTG TTATTGCTGA GCTATTGGTT ATACCAGCAG CATGATTATT TAGGACAGCT TGCCGCCGCT ATGGCATGCG GCTTACAAAA CGCGATGGTT GCGACATATA GCGGGGCAGT TATTCGTACC ACGCATTTAA CAGGGCTAAC TTCAGATATG GGCGCTGCCA TCGGTAATTG GCTCGCTGGT CGGCGCATCA GTAAACCGAC ATTAGGGTTT CAGGCAATTA TTTGGTACTG CTTTTGCGCT GGTAGTGCCG TAGGCGCTTT TTTATATGCC AGAGTGGGCT ATGGCGCTTT GTTTTTGCCC ATTACTATTG TTTTGAGCGC AGCGTTCGTA TACAACTATG TGTCAGACAA TCTACCAGAA AAAAGACAGC CAAGAAAAAA ACGCCCATCA GTTTGA
|
Protein sequence | MITRLPRWIF WGGAVLAFSA GCVNTAALMG FTNLSVSHVT GNVSLFAAAI AYLDARSILY IGALLLSFLA GAILSGFVIG QTSLKLGRRY GSALYMEAAL LLLSYWLYQQ HDYLGQLAAA MACGLQNAMV ATYSGAVIRT THLTGLTSDM GAAIGNWLAG RRISKPTLGF QAIIWYCFCA GSAVGAFLYA RVGYGALFLP ITIVLSAAFV YNYVSDNLPE KRQPRKKRPS V
|
| |