Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_0890 |
Symbol | tatD |
ID | 3514891 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | + |
Start bp | 1064656 |
End bp | 1065465 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637669579 |
Product | TatD family Mg-dependent DNase |
Protein accession | YP_264177 |
Protein GI | 71065450 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0084] Mg-dependent DNase |
TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.621664 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.629167 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTACAA CGAGATTGTT TATGTTTACT GATAGCCACT GTCATCTTAA TCGTTTAGAT TTAACCAAGT ACGATGGTCA ATTGTCTGGC GCAATTGCTG CGATGAAAGA AGCTAATGTT ACCCGTGCGA TGGCAATTAT GTGTGATTTT GCTGAATATG ATGAAATTGC CAATATTATC AAGATTTATG GCGATGAAAC CTTAAACCTT GGTATGAGCG TCGGCATCCA TCCCTGTGAA GATATCAGCG TCTTACAAGC GGTCACAATT GAGCGTTTGA TAGAAACCGC TGATACTGAT CATGTGTGGG CAATAGGAGA GACGGGGCTA GATTATTACT GGTCAACGGA TAATAAAAAA GCGCAACAAG CCAGCCTTGC CCATCATATT CATGCCAGCC AACACCTAAA AAAACCACTT GTCGTCCATA TGCGTGATGC CAAAGAAGAT ACGATTGATA TCTTAAAAGC AGAAGGTGCT GAGCATGGCA TTATTCATTG CTTTACTGAG GATTGGGAGA CGGCAAAACG CGCCTTAGAT TTAGGGTTTT ATATCTCATT CTCAGGTATT GTCAGCTTTA AAAGCGCCCA AAATATCAAA GATGCGGCAA AAAACATGCC AAGAGATAGA ATATTGATCG AAACGGATAG CCCCTATTTA GCGCCTGTCC CCAAACGCGG CAGACCTAAT GAGCCGGCGT ACGTGCCTTA TGTCGCCAGT TGTATTGCAG AGATGTATGG CTGTAGCGCG GAAGAGGTCG GTGCACTCAC TGCAAAAAAC TTTGAGAATT TACTAGCACA GTATCATTAA
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Protein sequence | MTTTRLFMFT DSHCHLNRLD LTKYDGQLSG AIAAMKEANV TRAMAIMCDF AEYDEIANII KIYGDETLNL GMSVGIHPCE DISVLQAVTI ERLIETADTD HVWAIGETGL DYYWSTDNKK AQQASLAHHI HASQHLKKPL VVHMRDAKED TIDILKAEGA EHGIIHCFTE DWETAKRALD LGFYISFSGI VSFKSAQNIK DAAKNMPRDR ILIETDSPYL APVPKRGRPN EPAYVPYVAS CIAEMYGCSA EEVGALTAKN FENLLAQYH
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