Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_0122 |
Symbol | |
ID | 3514726 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | + |
Start bp | 144428 |
End bp | 145138 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637668806 |
Product | haloacid dehalogenase-like hydrolase |
Protein accession | YP_263430 |
Protein GI | 71064703 |
COG category | [R] General function prediction only |
COG ID | [COG0546] Predicted phosphatases |
TIGRFAM ID | [TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 0.817509 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCAAT TTGTAAAAGT GGTCTTATTT GACCTAGATG GGACACTGAT TGATACGGCT GCTGATTTTG TACGTATTAT TGGCAAAATG AGCCATGAAA ACGGCTGGCA AGCGCCCTCT GAGATAGAGA TTCGTGAGCA AGTCTCTGCA GGTGCTTCGG CGATGGTACA GCTGATGCTA CGTCATAATG ACCAGACAGA TTTTAGTGAA GAGACTTTGC TTGAGTTTCG TCAGCAGTTT TTGGACGATT ATGAAGCCGA TATTTGTGTG GATAGTTGTG TTTTTAACGG ACTTGAAGAT GTTTTAAGTG CCCTTGAAGA AAAGGGCGTA CCGTGGGGTA TCGTGACCAA TAAACCGCGC TATTTATCAG AGCTGTTATT AAAAAAAATG CAGCTAAACA CGCGCTGTGC GGTTTTAGTT TGTCCTGATG ATGTGTCACG TCCTAAGCCT GACCCAGAGC CTATGTATGC GGCGCTAGAG AAGCTTGGTA TTCCTCGCGG CGCTGCTGCA AGTGTGATTT ATGTTGGCGA TCATATCCGT GATATTGAAG CTGGCAATGC CGCTGGTATG CTGACGATTT TGGCCGCTTA TGGTTATATT CCGCCTGAAG ATCAGAACAA CTTGAAGAAA TGGGGTGCAG ATTATATTAC CGATACCCCT GAGCAGTTGA GTAAATTACT GCTTTCTTCT GGTAAGTTCG ACTATTTATA A
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Protein sequence | MSQFVKVVLF DLDGTLIDTA ADFVRIIGKM SHENGWQAPS EIEIREQVSA GASAMVQLML RHNDQTDFSE ETLLEFRQQF LDDYEADICV DSCVFNGLED VLSALEEKGV PWGIVTNKPR YLSELLLKKM QLNTRCAVLV CPDDVSRPKP DPEPMYAALE KLGIPRGAAA SVIYVGDHIR DIEAGNAAGM LTILAAYGYI PPEDQNNLKK WGADYITDTP EQLSKLLLSS GKFDYL
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