Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_0089 |
Symbol | hemC |
ID | 3514677 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | + |
Start bp | 103385 |
End bp | 104422 |
Gene Length | 1038 bp |
Protein Length | 345 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637668773 |
Product | hydroxymethylbilane synthase |
Protein accession | YP_263397 |
Protein GI | 71064670 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0181] Porphobilinogen deaminase |
TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACCA TGCAGCAACC TGCTTTGACT ACCTTAAATA TTGCCACGCG CCAGAGCCCA TTGGCATTAT GGCAAGCTGA GCATATTCGT GATCGGCTAC TAGTGTTGTA TCCTGAGATG ACGATTAACC TGCTAAAAAT CGTCACTAAG GGTGACAAAA TTTTGGATAC GCCACTGGCA AAAATTGGCG GTAAAGGTTT GTTCGTCAAA GAGCTTGAGC AGGCATTGTA TGACAAGCAG GCAGATATTG CGGTGCACTC TCTAAAAGAT GTGCCCATGG ATTTACCAGA AGGCTTGACG TTAGGTGTTT ATTGCAAGCG TGCCTCGCCA ACCGACGCTT TTGTTTCCAA CACTTATCAT AGTATCGATG AATTGCCACA AGGTGCGGTA GTCGGTACAG CAAGTTTGCG TCGTCAGTGT CAAATCAAAG CTTATCGTGC AGATTTGCAA ATTAAAACCC TGCGCGGCAA TGTCGGTACG CGTTTAAGCA AGTTAGATGC TGGCGAGTAT GATGCTATTA TTTTGGCGAC TAGTGGTCTA CAGCGTCTTG AGCTTAATGC ACGTATTCGC AGCGAATTGG ATATCGATAT ATGTTTGCCA GCGGTTGGGC AAGGTGCGTT AGCGATTGAA TGCCGCGCAG ATGATGACGA AGTATTAAAG TTATTGGCAC CTCTTAATGA TGACAAAGCC CGTATTCGCC TGATTGCTGA GCGCGCATTA AATCGACATC TGCAAGGTGG TTGCCAAGTA CCTATCGCCG CTTATGCTGT ACTGCAAAAG GCAGACGCAT TGGCTGCTGA TAATGACGAC AATGGCAGTG TTAGCAACAA TAATGACGCA GGCGATACCT TGTGGTTGCG TGGTCGCGTT GGTCAAGAAG ATGGTAGCGA GCTGCTTAAA GTTGAAAAGC GTCAAACATT AACGGGCAGT CAAGCTGAGC AAGAAGCCCA AGCCAACCAG CTGGGTATCG AAGTTGCTGA GATGCTATTA GAAGCTGGTG CTGGTGCTAT TTTGTCAGCG ATCTATCACC CTGAATAA
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Protein sequence | MSTMQQPALT TLNIATRQSP LALWQAEHIR DRLLVLYPEM TINLLKIVTK GDKILDTPLA KIGGKGLFVK ELEQALYDKQ ADIAVHSLKD VPMDLPEGLT LGVYCKRASP TDAFVSNTYH SIDELPQGAV VGTASLRRQC QIKAYRADLQ IKTLRGNVGT RLSKLDAGEY DAIILATSGL QRLELNARIR SELDIDICLP AVGQGALAIE CRADDDEVLK LLAPLNDDKA RIRLIAERAL NRHLQGGCQV PIAAYAVLQK ADALAADNDD NGSVSNNNDA GDTLWLRGRV GQEDGSELLK VEKRQTLTGS QAEQEAQANQ LGIEVAEMLL EAGAGAILSA IYHPE
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