| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_0024 |
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| Symbol | |
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| ID | 3514760 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter arcticus 273-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007204 |
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| Strand | + |
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| Start bp | 26978 |
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| End bp | 27697 |
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| Gene Length | 720 bp |
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| Protein Length | 239 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637668706 |
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| Product | ribosomal small subunit pseudouridine synthase A |
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| Protein accession | YP_263332 |
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| Protein GI | 71064605 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.0145109 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0845626 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTAGGCA ATCGTATGCG TCTAGATAAA TTTCTGAGTA AAGCCACTGA ACTGTCGCGT
AAAGAATCAA AAAAAATTCT GCACGCTGGT GAAGTCACAG TAAACGAGCA GGTCATCAAA
GATCCCGGCG TACATGTCGA TATCGTCAAT GACGATGTAC AGTGGGCAGG CGAGCCATTA
TCGGTCGCGA CTGGCAATCG CTATATCTTG CTTCATAAAC CTGAAGGCTT TGAATGTACC
TTAAAAGCTA AAGAATACCC AATCGTCACT GACCTTATTG CGGTGCCAGA GCTTGGTAGT
TTACGTATTG CTGGGCGTCT TGATGTTGAT ACGACTGGCG CATTGCTCAT CAGTGATGAT
GGCGGCTGGC TACATCGTGT AACTAGCCCG AAGCACGAAC ATGCCAAAGT CTACGAGTTG
ACGTTAGCAG ATGCTATGGA TAGTGACGCT CAAGCCAATG CTATCAAAGA AGTGGCAGAA
GGGATTTTGT TAGAAGGTGA CCACGAAGAA ACCAAGCCTG CAACCCTCGA GTTCATCGAT
GAAACTCATG CGCGTTTAAC CTTGGAGCAA GGTAAATATC ATCAAGTAAA ACGTATGATG
GGTTATTTTG GTAATAGAGT GGTTGAGCTG CATCGTGCCA GTGTCGGTCA TATTACTTTA
GACGGGCTAG AGAAAGGCGA CAGTCGTTTC TTAACGCCAG AAGAAGTGGT AAAATTCTAG
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| Protein sequence | MVGNRMRLDK FLSKATELSR KESKKILHAG EVTVNEQVIK DPGVHVDIVN DDVQWAGEPL
SVATGNRYIL LHKPEGFECT LKAKEYPIVT DLIAVPELGS LRIAGRLDVD TTGALLISDD
GGWLHRVTSP KHEHAKVYEL TLADAMDSDA QANAIKEVAE GILLEGDHEE TKPATLEFID
ETHARLTLEQ GKYHQVKRMM GYFGNRVVEL HRASVGHITL DGLEKGDSRF LTPEEVVKF
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