Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyc_0006 |
Symbol | |
ID | 3514687 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter arcticus 273-4 |
Kingdom | Bacteria |
Replicon accession | NC_007204 |
Strand | - |
Start bp | 8586 |
End bp | 9371 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637668688 |
Product | IS3 family transposase |
Protein accession | YP_263314 |
Protein GI | 71064587 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.000149374 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCGAAAA GCAGTTTCTA CTACCATAGA ACCATGCTAG GGGATAAAGA TAAATACGCT GACTTAAAAC AGCGTATCAC GGCGCTATAC CACAAGCATA AAGGCAGATA TGGCTATCGT AGAATGACTG TCGCATTAAA ACAGTTAGGT GTTCATCATA ATCATAAGCT TATTGCCAAA CTCATGAAAC AGTTGACACT CAGTGCAAAG ATAAGAAGAC AAAAGTACCG CTCCTATAAA GGACAGCAAG GTAAAATAGC AAAGAATTAT TTAAAACGTC GGTTTAAAGC AAGCAAACCA CATAAACGTT GGCTCACTGA TATTACTGAG TTTAAGGTAG GTGACCATAA GTTATATTTA TCGCCAATAC TCGATTGTTA TAACAATGAG ATAGTCAGTT ATACGCTCTC AAGAAGGCCA ACCTATGATT TGGTAAGCCA AATGCTTGAT AAGGCGTTGG ACAAGACTGG AAAACATCGT CATAAGACAT TAATGCTACA TTCTGATCAG GGATGGCATT ATCAAATGAA GCCGTTTAGG GAGATGCTTA AAAAGCATCA GATAAAACAG AGTATGAGCA GGAAAGGCAA CTGCTTGGAT AATGCGTTAA TGGAGGGGTT CTTCGGTACG CTAAAGTGTG AGACTATCTA TATTGAGAAG CCTAAAACGA TTGAAGCTTT AGAGAGACAG ATTCATGAGT ATATTCATTA CTACAATCAT GAACGTATTC AGCTTAAACT AAAAGGACTG AGTCCTGTAC AGTACAGAAC TCAGTCTTTG AAATAA
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Protein sequence | MPKSSFYYHR TMLGDKDKYA DLKQRITALY HKHKGRYGYR RMTVALKQLG VHHNHKLIAK LMKQLTLSAK IRRQKYRSYK GQQGKIAKNY LKRRFKASKP HKRWLTDITE FKVGDHKLYL SPILDCYNNE IVSYTLSRRP TYDLVSQMLD KALDKTGKHR HKTLMLHSDQ GWHYQMKPFR EMLKKHQIKQ SMSRKGNCLD NALMEGFFGT LKCETIYIEK PKTIEALERQ IHEYIHYYNH ERIQLKLKGL SPVQYRTQSL K
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