Gene PsycPRwf_2179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_2179 
Symbol 
ID5206800 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp2716752 
End bp2717243 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content45% 
IMG OID640600426 
Producthypothetical protein 
Protein accessionYP_001281069 
Protein GI148653976 
COG category[S] Function unknown 
COG ID[COG0393] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.780072 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATACTG TTTTTGACTT TTTTATCGAT AATATAGTTT TTATTGGGCT GTTTTTTATT 
GGATGGGTGT TTGGTCGTTA TAACGAAAAT GATCATCTTA AGCGTCTAGA TAGCACCGAA
AAAGAGCTGG GGCACATCAT TGTCTCAACT GAACGCTTTT ATCAGCCGAT CATTGCCGAT
GCCACGCAGC CAGTGTTGGT GATGGGCAGT GTGGTGATTG CTCAAGATTA TTTTAAGATG
ATAGTCGCTC GGGTGCTTAA TGTGTTTGGT AAAAACCTCA CCACCTATGA GACGCTACTT
GATAGGGCTC GGCGTGAGGC GGTAATTCGC ATGAAGCTTG AGGCGCAGTT TTTGGGCTAC
AATCAAGTCT ATGGTCTGCG CTTGGAGGTC ACCAGTATCA ATATTAGCGG AAGTATGGTG
GAAGCCATTG CTTATGGCAC GGCGGTTTAT ACTGTGGGCA ATCCAAAAAT CCCGCCGCCA
TTACCCTTAT AG
 
Protein sequence
MDTVFDFFID NIVFIGLFFI GWVFGRYNEN DHLKRLDSTE KELGHIIVST ERFYQPIIAD 
ATQPVLVMGS VVIAQDYFKM IVARVLNVFG KNLTTYETLL DRARREAVIR MKLEAQFLGY
NQVYGLRLEV TSINISGSMV EAIAYGTAVY TVGNPKIPPP LPL