Gene PsycPRwf_2141 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_2141 
Symbol 
ID5204600 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp2673173 
End bp2673874 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content49% 
IMG OID640600388 
Producthypothetical protein 
Protein accessionYP_001281031 
Protein GI148653938 
COG category[R] General function prediction only 
COG ID[COG1451] Predicted metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0199813 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGATTGA ATCATGTGCC ATCACAAACA CCGCCCCTTG ATGACCATCA GCCACTAAGG 
CGCAGGTTAG CAGAAGCCGG TATTGCCCTT GAAATCACAC GAAAGCGGGT GAAAAACATC
AATTTTCGGC TCAGGCCACA TATCTTGTCG GTCTCAGCTC CGCACTACGC CAGTGATAAA
CAGGTTATGG CCGCTTTGGC TCGGCGTATA CAATGGGCGA TTGCTCAGCA TGCGGTACTG
TTAAAACGCC AAAGCTTGAT ACAGAGTCCA TTGCCGGATA GTCATAGCAC CGAGTCTTCG
CCCTCGAATA ATCTATCCGT TATTAGATTA TGGGGACAGC GGCAATCATT AACTATGAGC
GAGACTGAGC GAATTAACTG GTATCGCCGT GAGCTGCAGC AGGTTATGCC AGATTTATTT
GCCAAATGGC AGCCGATCGT GGGGGCATAC GCCAACGAGA TGCGGATAAA AAAGATGAGC
ACTCGATGGG GCAGCTGCAA TACTCGGGCT AAACGTATTT GGCTGTCGGT GTATTTGCCA
GCTTATCCGA TTGAGTGCAC TGAATATGTC ATCGTGCACG AGCTGTGTCA TTTACATCAT
GCCAATCACA GCACCGCCTT TTGGAATCAG GTAAAGCATG CCATGCCAGA CTACAAACGC
TGGCATGATA TGTTGGCAGG CAAATCAATT TTGATAGATT AG
 
Protein sequence
MRLNHVPSQT PPLDDHQPLR RRLAEAGIAL EITRKRVKNI NFRLRPHILS VSAPHYASDK 
QVMAALARRI QWAIAQHAVL LKRQSLIQSP LPDSHSTESS PSNNLSVIRL WGQRQSLTMS
ETERINWYRR ELQQVMPDLF AKWQPIVGAY ANEMRIKKMS TRWGSCNTRA KRIWLSVYLP
AYPIECTEYV IVHELCHLHH ANHSTAFWNQ VKHAMPDYKR WHDMLAGKSI LID