Gene PsycPRwf_1900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_1900 
Symbol 
ID5206204 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp2360440 
End bp2361276 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content49% 
IMG OID640600131 
Producthypothetical protein 
Protein accessionYP_001280790 
Protein GI148653697 
COG category[S] Function unknown 
COG ID[COG2976] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000294416 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAAAC GTCCCACGCC CACTTCACCA GACTTGAACA ACAGCGGTGA GACCCCTTCA 
ATGGACAAGC TAAAGCAGGC TGCCGGCTAT ATCATAGGTG CTATTTTATT GGCATTAATT
GGTTACTTTG GCTGGACCTA TCTACAAAAC TCGGGTCTAA AAGCCGATAC CGTAGCTGCC
GATAAGTACT CGGCTATTGA GACGGCCAAT GATGAGCTAA TGGGTGCGCC ACAAGTAGAT
GCCGCCGCCA GCAAAAAGCT CAACTCAGAC ATTGATGATC TTGTGGCCAA GCATGGTTCA
ACCATTTATG CTTGGCAAGC GCTGATGATT AAATCGCGTA ATGCTGTGGA TGCAAAAGAT
TATAAAACCG CCGCTGCGGC CTTAAAAAAG GCGATGGAGA TTGATGTTAA AGACCCAGGT
CTTCATGCGT TAACCCAGCT TCGTTATGCC TCTGTGCTAC TGAGTGATGG GGATATCGAT
GGCGCATTAA CTCAAGCATC TACCGATGTG CCTGTGGCCT TTGAAGCGAC TCAGCAAGAG
CTATTGGGTG ATATTTATCT GGCTCAAAAA GAAGATGAAA AAGCGCTGCG TGCCTATCAA
AACGCATGGA GCCTTTTGTC TAAGCGTCAT GAAGAGCGTC CGTTTTTGCG CTTAAAGCTT
GAAAGCTTAG GGGTAACGCC TGAAGCCATT GAACCGACGA CTCCTGTTGT GAATATGCCT
GAGAATGTGG AGCAGCCTGC AGAGGGTGAA TCAGATGCTG CTCTTGAAGC CGCGCTCTCG
CAGCTGGCAG CCGCTCAAGC GTCGGATGCA CAAGGTGAGG CAGGTCAGGC TCAGTAA
 
Protein sequence
MAKRPTPTSP DLNNSGETPS MDKLKQAAGY IIGAILLALI GYFGWTYLQN SGLKADTVAA 
DKYSAIETAN DELMGAPQVD AAASKKLNSD IDDLVAKHGS TIYAWQALMI KSRNAVDAKD
YKTAAAALKK AMEIDVKDPG LHALTQLRYA SVLLSDGDID GALTQASTDV PVAFEATQQE
LLGDIYLAQK EDEKALRAYQ NAWSLLSKRH EERPFLRLKL ESLGVTPEAI EPTTPVVNMP
ENVEQPAEGE SDAALEAALS QLAAAQASDA QGEAGQAQ