Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_1876 |
Symbol | |
ID | 5204697 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | - |
Start bp | 2334747 |
End bp | 2335421 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640600107 |
Product | lysine exporter protein LysE/YggA |
Protein accession | YP_001280766 |
Protein GI | 148653673 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1280] Putative threonine efflux protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCTGT CCGTATTTTT ATTGTTCTTT TTTAGCACTT TTTTAATCTC AGCCACACCC GGTCCTAATA TGCTGTTGGC CTTTCAATAC GGGCTTAATC ATGGGGTGCG ACAGACACTT TGGGTATTGG CTGGGCTCAG TGTGGGTCTG TTTGCCTTAT TAATTTCGGC GCTGCTAGGC ATTGATATCA TCAGCCGTAA ATTGCCTTGG CTACTGACAG TGATGAAGGT GGCGGGGGCA TTATATCTAA TTTATTTGGG TATTCAGTCT TGGCGACATG CCGATGATAA TGTGCAGTTT GCCAAGGGAT CAGGGTCAAC AAGTGCTAAC ACAGGTTCAA CGAATACTGG CAATAGTCTA AAAACTGCCG GCCAGCGATT TCGCCAAGGC ATGTGGGTGT CACTGTCTAA CCCGAAAGCC ATTTTGTTTT TTGCCGCTTT TTTCCCCAAG TTTATTAACT TTAGCGCGCC GCTGTGGCCA CAATATGTGT GGCTGACTTT AGGGTTTTTT GTGAGTGAGA CCACTTGGCA AATAGTCTAT ACCTTAGGCG GCACTAAGCT TTCAGGCTGG TTGGGGCAGG GCGCAAGACT GCTTTGGCTC AATAGAATCT GTGGCCTGAT ATTTATAGTT ATCGCCGCCG CTTTGCTGTG GGAAGTGATC AGCGTGGATA TCTAG
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Protein sequence | MSLSVFLLFF FSTFLISATP GPNMLLAFQY GLNHGVRQTL WVLAGLSVGL FALLISALLG IDIISRKLPW LLTVMKVAGA LYLIYLGIQS WRHADDNVQF AKGSGSTSAN TGSTNTGNSL KTAGQRFRQG MWVSLSNPKA ILFFAAFFPK FINFSAPLWP QYVWLTLGFF VSETTWQIVY TLGGTKLSGW LGQGARLLWL NRICGLIFIV IAAALLWEVI SVDI
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