Gene PsycPRwf_1876 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_1876 
Symbol 
ID5204697 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp2334747 
End bp2335421 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content47% 
IMG OID640600107 
Productlysine exporter protein LysE/YggA 
Protein accessionYP_001280766 
Protein GI148653673 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTGT CCGTATTTTT ATTGTTCTTT TTTAGCACTT TTTTAATCTC AGCCACACCC 
GGTCCTAATA TGCTGTTGGC CTTTCAATAC GGGCTTAATC ATGGGGTGCG ACAGACACTT
TGGGTATTGG CTGGGCTCAG TGTGGGTCTG TTTGCCTTAT TAATTTCGGC GCTGCTAGGC
ATTGATATCA TCAGCCGTAA ATTGCCTTGG CTACTGACAG TGATGAAGGT GGCGGGGGCA
TTATATCTAA TTTATTTGGG TATTCAGTCT TGGCGACATG CCGATGATAA TGTGCAGTTT
GCCAAGGGAT CAGGGTCAAC AAGTGCTAAC ACAGGTTCAA CGAATACTGG CAATAGTCTA
AAAACTGCCG GCCAGCGATT TCGCCAAGGC ATGTGGGTGT CACTGTCTAA CCCGAAAGCC
ATTTTGTTTT TTGCCGCTTT TTTCCCCAAG TTTATTAACT TTAGCGCGCC GCTGTGGCCA
CAATATGTGT GGCTGACTTT AGGGTTTTTT GTGAGTGAGA CCACTTGGCA AATAGTCTAT
ACCTTAGGCG GCACTAAGCT TTCAGGCTGG TTGGGGCAGG GCGCAAGACT GCTTTGGCTC
AATAGAATCT GTGGCCTGAT ATTTATAGTT ATCGCCGCCG CTTTGCTGTG GGAAGTGATC
AGCGTGGATA TCTAG
 
Protein sequence
MSLSVFLLFF FSTFLISATP GPNMLLAFQY GLNHGVRQTL WVLAGLSVGL FALLISALLG 
IDIISRKLPW LLTVMKVAGA LYLIYLGIQS WRHADDNVQF AKGSGSTSAN TGSTNTGNSL
KTAGQRFRQG MWVSLSNPKA ILFFAAFFPK FINFSAPLWP QYVWLTLGFF VSETTWQIVY
TLGGTKLSGW LGQGARLLWL NRICGLIFIV IAAALLWEVI SVDI