Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_1818 |
Symbol | |
ID | 5206308 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | - |
Start bp | 2257251 |
End bp | 2258000 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640600047 |
Product | pili assembly chaperone |
Protein accession | YP_001280708 |
Protein GI | 148653615 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3121] P pilus assembly protein, chaperone PapD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.000389193 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCTATTAA ATTGCAAATT ATTAAACCGC AAAATGTGTA GAACGGCTCT ACTGGCATTA ATGCTACCTT TTACAGCTGC TAATGCTGAT GTGGTTATCC ATGGTACTCG TGTTATATAC CCTTCTGATG CTCGTGAAAT AACCGTTAAG GTAACTAATG AAGGCACAAG CCCAGCCTTA GTGCAAGCTT GGATCGATGA AGGGGATGCT AAAATCACTC CCGATCAATC AAAATCCCCA TTTGTTATTA CCCCGCCTAT CACTCGTGTT GAGCCGGGTA AAGGCCAATC ATTACGAGTT AGTGCTTTGC CTGGGGTTAA TTCGCTTAGC AAAACTCAAG AAAGCTTGTT TTGGTTGAAT GTATTAGATA TTCCGCCGAA ACCCACTAAA AAAGATGCTG ATAGTGGCTC AGATAACTTT TTGCAATTGG CGATTCGCTC ACGTCTTAAG TTCTTTTATC GTCCTGCAGG TCTTAAGGGG GATAGCTTGT CTGCTCCTAA ACAATTACAG TGGTCAGTTC AAGGCAATAC CTTGACCATT AAAAATCCTA CTCCTTATCA CGTTACTATT ACTTCTATTG TGCAAAAACC TGTCGGTGCT GCAACAGATA AAGCAGAGGT GTTAACCGAT GGGATGATGT TACTACCATT TTCTGAACAA AAAATTAATG TTAAAAACCC TAATCTAAAA GGCATGACCT TTACCACAAT TAATGATTAT GGTGGCCGAG TACAGCAGGC AGTTGAATAA
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Protein sequence | MLLNCKLLNR KMCRTALLAL MLPFTAANAD VVIHGTRVIY PSDAREITVK VTNEGTSPAL VQAWIDEGDA KITPDQSKSP FVITPPITRV EPGKGQSLRV SALPGVNSLS KTQESLFWLN VLDIPPKPTK KDADSGSDNF LQLAIRSRLK FFYRPAGLKG DSLSAPKQLQ WSVQGNTLTI KNPTPYHVTI TSIVQKPVGA ATDKAEVLTD GMMLLPFSEQ KINVKNPNLK GMTFTTINDY GGRVQQAVE
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