| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1560 |
|---|
| Symbol | |
|---|
| ID | 5206765 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter sp. PRwf-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009524 |
|---|
| Strand | - |
|---|
| Start bp | 1913252 |
|---|
| End bp | 1915231 |
|---|
| Gene Length | 1980 bp |
|---|
| Protein Length | 659 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640599782 |
|---|
| Product | AAA ATPase |
|---|
| Protein accession | YP_001280451 |
|---|
| Protein GI | 148653358 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.0000000170714 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 0.00000000068929 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | ATGAAACAAG CGACCGCACT GGATATTTTA AAAACGGGCA AGAATGTATT TTTGACCGGC
TCTGCAGGCT CAGGAAAGAC CTATACGCTA AATGAGTATA TCCATTATCT ACGGGCGCGC
CGTGTGCCAG TAGCCACCAC AGCCAGTACC GGCATTGCTG CGACCCATAT GAACGGTATC
ACCATCCATA GCTGGTCAGG GATTGGCATC AAAGATGAGC TAACTGAGCG TGATTTGGTG
AATTTATCTC GCAAAAAAGT GCTCAAAGAC AGACTGCAAG AAACAGCGGT ACTGATTATT
GATGAAATCT CTATGCTACA TGCTAAGCAA TTGAACTTGG TCAACCAAGT CCTAAAGCAC
ATGCGCCAAA ACGATAAGCC CTTTGGGGGA ATTCAGGTGG TGGTGGCCGG TGACTTTTTT
CAGCTGCCGC CTGTGGGCAG CCGAGGTGAG AGTAACCGCG ATAAGTTTGC ATTTATGTCG
CAAGCTTGGC TGGATGCCGG CTTTAAGATT TGTTATCTGA GCGAACAGCA TCGTCAACAA
AGCGGTGAAG GAGAAGATGC TCAAATCACA CTGGATAATA TTCTCAATCA AATTCGAGGT
GAAAACGGGG TATCCGCTGC GGCCATTGCA GCCTTGCAAA ACACCTTTTA CCAAGACGTG
GATGTCAATC GTACTCGGCT ATATACTCAT AACGTCAACG TTAATAAAAT CAATGAGCAT
GAGCTGGCAT TGTTAGAGGG CGAAACCGTC ACCTACAATG CCATTGCTCA TGGTGATAAT
AAACTGGTAG AAACCCTAAA GAAATCAGTG CGTACCAGTG ATGAGCTGAC CCTAAAAACG
GGTGCTAAAG TGATGTTCAT CAAAAATAAT AGCGAGCTTG GGGTGTCAAA CGGCACCATG
GGCGAATTGA TTGGATTTAC CACCATCAAA CCGCTCAAGT TGAGCATAGC GACCATTGAT
GATGGCAGCG CAGATGAGGA TGGCTCGGCA GAAGCCCTAG ATGAGGCTCT AGAAACGTTA
GAGGATGCTG AGGCGTTGGC GCAGAATGAA TCTGATAAGC CCTTAGTCTC TACTGATCGC
TATCCTATTG TCCGACTTAA TAGTGGCCGG CAGGTGATCG CTGAGGGCGA GGAGTGGATA
GTTGAAGATG AGAGCGGCGA GATTTTAGCC AGTTATACTC AGATCCCACT GACGCTGGCT
TGGGCCATTA CCATTCATAA ATCACAAGGC ATGACACTAG ATGCTGCCGA AATCGATTTA
TCCAAGACTT TTGAGCTGGG TCAAGGCTAT GTGGCCTTAT CTCGCTTAAA ATCGCTTGAG
GGTCTAAAGC TATTGGGTAT GAATGATTTA AGTTTACGCT TAGACCCCTT AGCACGTGGG
GCGGATTCAC GCTTTAAGGA TCTGTCTTTA GAGGCGCAGC AAGCCTTTGA AGATATCGAG
CGTGAGGTAC TACAAGAGTC GCATGAAAGA TTTGTGATTG CCTCAGGCGG CACGTTAAAT
AAGGCCAATA TTGCCGCCTT TGAAAAAGAG TATAAAAACC GCAAAAAAAA GCAGGCGCAA
AAGCTGGCTC AAAAAGACAA GCTAAGCAAT CAATTAAGCG ATCACTCTGA GAGTACCTTA
ATGGCCACTC GTATCTTGCT AGAGGAGAGC TTAAGCATTG CTGAGATTGC TCAAAGTCGA
GGGCTGGCTC AGTCGACCAT TATGGGGCAT GTGGCGCGTC TTCGACGCCA AGATCCAAGC
TTAAACTGTG AGCATTTGCG CCCAGATGAG GCAATCTTAA ATAAAGTCAG TAAAGCGGTG
GATGCCATTA TTGCTGCTGG CGATCCTAAT GATTTTAATG CGGCTGATGA CAGCACTCAA
AGCGTGAAGG GCGGGGATGA CTTTGATAAA CAGCGTATCA AACTGCGTCC TATCTATGAG
TATTTAAAAC AGCAAATAGA TTATAATACC ATCCGCTTAG CGCTTGTCTT TATTGATTGA
|
|---|
| Protein sequence | MKQATALDIL KTGKNVFLTG SAGSGKTYTL NEYIHYLRAR RVPVATTAST GIAATHMNGI
TIHSWSGIGI KDELTERDLV NLSRKKVLKD RLQETAVLII DEISMLHAKQ LNLVNQVLKH
MRQNDKPFGG IQVVVAGDFF QLPPVGSRGE SNRDKFAFMS QAWLDAGFKI CYLSEQHRQQ
SGEGEDAQIT LDNILNQIRG ENGVSAAAIA ALQNTFYQDV DVNRTRLYTH NVNVNKINEH
ELALLEGETV TYNAIAHGDN KLVETLKKSV RTSDELTLKT GAKVMFIKNN SELGVSNGTM
GELIGFTTIK PLKLSIATID DGSADEDGSA EALDEALETL EDAEALAQNE SDKPLVSTDR
YPIVRLNSGR QVIAEGEEWI VEDESGEILA SYTQIPLTLA WAITIHKSQG MTLDAAEIDL
SKTFELGQGY VALSRLKSLE GLKLLGMNDL SLRLDPLARG ADSRFKDLSL EAQQAFEDIE
REVLQESHER FVIASGGTLN KANIAAFEKE YKNRKKKQAQ KLAQKDKLSN QLSDHSESTL
MATRILLEES LSIAEIAQSR GLAQSTIMGH VARLRRQDPS LNCEHLRPDE AILNKVSKAV
DAIIAAGDPN DFNAADDSTQ SVKGGDDFDK QRIKLRPIYE YLKQQIDYNT IRLALVFID
|
|---|
| |