Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_1475 |
Symbol | |
ID | 5206619 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | + |
Start bp | 1806393 |
End bp | 1807070 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 640599694 |
Product | hypothetical protein |
Protein accession | YP_001280369 |
Protein GI | 148653276 |
COG category | [S] Function unknown |
COG ID | [COG4886] Leucine-rich repeat (LRR) protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.661845 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.169207 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAATT CCATCGATAA AACAACTCCC TTTGCAAATA CTGCAAACTC CCCTACTACT TCTCCTTCTA ATACACAAGT AGAAGCTTCT AATACACAAG TAGAAGACTG GATGTTAGAG ATTTGGGACT GGATAGATAA CCATAGTATC CATGGCAGTG AAGACAGTAT TGTCCCTCAA GACCCACAAT CATTACGTCA ACTTGAAAGA TTAGATTTAG GATTTGGTAG ATCAATAACC CATGATGTCA TAGACGGTAA ATCAGTTTTG CGTGTCTTAA AGGAATCTAA AAAACCTTTA CCCGCTGCTA TAGGTAATTT AAAAAACTTA AAGTATCTTA GACTAATTGG TTTTAGTGAA TTGCCAGATG AGATTGCTCA ATTAGATAAT TTGGAAGAGT TAGTTTTTCT TAAATGCGAT TTCGTTGAGT TCCCAAAAGT ATTATGTGAA CTTAGAAACC TTAAGTCACT TAATATTTAT TCAAAAACTT TACAAAAATT ACCTGACGAG ATTGGCAACC TCACTTCGCT AACAAATATA AATATTACTG GCACCAGTAT CAAACACCTT CCTGATTCTA TTGCCAATCT AACCAATCTA GAGACTATGA AAACATATGC TGACCTCTGC TGTCAACAAC GGAGAAAAAC ATTTGGTAGA TTTCATCAGG CAGCCTGA
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Protein sequence | MNNSIDKTTP FANTANSPTT SPSNTQVEAS NTQVEDWMLE IWDWIDNHSI HGSEDSIVPQ DPQSLRQLER LDLGFGRSIT HDVIDGKSVL RVLKESKKPL PAAIGNLKNL KYLRLIGFSE LPDEIAQLDN LEELVFLKCD FVEFPKVLCE LRNLKSLNIY SKTLQKLPDE IGNLTSLTNI NITGTSIKHL PDSIANLTNL ETMKTYADLC CQQRRKTFGR FHQAA
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