| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1262 |
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| Symbol | |
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| ID | 5205974 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | - |
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| Start bp | 1551736 |
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| End bp | 1553619 |
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| Gene Length | 1884 bp |
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| Protein Length | 627 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640599481 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_001280159 |
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| Protein GI | 148653066 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.523793 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0747451 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACATCGC AGACAGACCA ATATCCTTCT AACGGCACTT TTTTGCGCCT GCTGATACCG
CTTTGGGCGG TGTGCATCGC CGTTGTATTG ATGGCGAGTC CCCTAAGCGC CTATGCTGCT
GAGTCTAGTG TTATCGAGCA GCCCGATAGC TTGGTGGCCT ATGTCAAGCA GCAGATGCAG
CAGCCCCAAG CTGACACGCT GACACCCACC CGCAGTTTGT TGGCCAAAAA TGAGCTGACT
GGCGAATTTA ATGACGCTTA TTTTGCGGTT AATAAGCTCA ATGCAGGGCT ACCTAAGCTT
GATCCTCCGC CAAATTTAGA GACACCACTG GCTACGCTGG ATTTTTTTAA CAGTGCCAGT
CTAAAAAGTG ACTTTGCGCT GGCAAGTTAT GCACTCAACC TCAACTCTAT AGAAGATGAC
CTACAGGTTA GTCATGCTTC AGATTTGGCA CAGAAGCTGG ATTACTTGCT AAGTGAACAA
GGCCTGTATG TCTTCGATGA GTTGCCTGAT CGCTCAGATG GCTTGATTGA ACCAGCATTG
GGCGGCTCTA ACCCCATACA AGGTATCGCT AGGCGCTCCA TTAAGCTTGG CAGTATCAAT
TACAAAAATC GCAGCGTACC GCTTTATTTA GAGCGGGTGC GTGTCGAGGG TGAAGCACCA
GTTTGGGTTT TTTCTTCACA AACTGTCGCC AATATTGAGG CGCTATATAG CATCCAGAAG
CCTGCCGGCT TTGAGCGCTA TCTGCCAGAG GTATTAACGG CCAAAGTTCT TGGTATCAGT
GTCTGGGAGA TACTGGTGCT CATCGTATTT ATGTTCACCA CTATGGGACT TGGCTTTGCG
CTTAGTAAAG GGGTGGCAAA ACTTAGTGAT TGGTATGTCA CTCATGCCAA AAAGCGCGGC
AATACTGAGG AGTTGTCTTT ACACAGTAAG GGTATTACTG ACTTTTTTTA CAAAATTACC
GTGCCGCTTA CGGTCACTAT TAGCTTGTCT TTAATGTTTG CCCTTGTTTC AGGGAGCCTG
CCTAAGGTTG AGGCCATAGG TACCTCAACA CGCCCCATTA TCTGGATTTG TTTGATCATA
AGCGGGTTGT GGCTGGGCAT ACGTGGCATT AATTTTTTTG CCAATCGTTA TCAAGATTAC
CAAATCGATG CGCTCGATGA AGAGCAGTTT AGTATTCAGC GTGAGCGTAT GACTTATGTG
TCTATCTTTA GACGCATTTT TATCTTTGTT ATGGTCATGG GCGGGCTGTG GATCAGTCTG
GCTGAGTTTA CTGACTTAGA GGGGCTAGGT ACCACGCTGC TGACCTCAGC AGGTATTGCC
GGTGTGGTGA TAGGTATTGC GGCACAGCCC ACGCTTGGTA ATATCATCGC TGGTTTTCAG
GTGGCAGTGA CGCAGCCGGT GAGAATCGGT GATACCATTA TGGTCGATGA CATTTGGTGT
GAGGTTGAGG ATTTACGCTA TACCTATGCG GTGCTCAAAA CTTGGGATGA CAGACGCCTG
ATTGTGCCCA TGAAGTACTT TGTGACTGAG GTGTTGGAAA ACTGGTCGCA CACCAATACC
CAACAATCAA GCGCCATCTA TTTGTATGTC GATTATGGGG CCGACATTGA TGCCATATCC
GATAAATTCT TTGAGTTGGT AAGAGCACAT GAGCTTTATA ATGTAGAGGT TGAGCCAGAT
TTTAGGGTCA TAGACGCCAC TAAAGATGGC ATCACCTTAC GCGGAAAAGT CAGCTCTGAT
GGGCCTTTAA ATGCTTGGAA TTTAGAGTGT GATATCCGTC AGCAGATGCT GGCGTATTTA
AATCAGCAGC ACCACATGCA TCTACCCACT GACCGCATTA CTTTAACCCC TAGACCGCTA
AGACACGGCT CTGACAACCG CTAA
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| Protein sequence | MTSQTDQYPS NGTFLRLLIP LWAVCIAVVL MASPLSAYAA ESSVIEQPDS LVAYVKQQMQ
QPQADTLTPT RSLLAKNELT GEFNDAYFAV NKLNAGLPKL DPPPNLETPL ATLDFFNSAS
LKSDFALASY ALNLNSIEDD LQVSHASDLA QKLDYLLSEQ GLYVFDELPD RSDGLIEPAL
GGSNPIQGIA RRSIKLGSIN YKNRSVPLYL ERVRVEGEAP VWVFSSQTVA NIEALYSIQK
PAGFERYLPE VLTAKVLGIS VWEILVLIVF MFTTMGLGFA LSKGVAKLSD WYVTHAKKRG
NTEELSLHSK GITDFFYKIT VPLTVTISLS LMFALVSGSL PKVEAIGTST RPIIWICLII
SGLWLGIRGI NFFANRYQDY QIDALDEEQF SIQRERMTYV SIFRRIFIFV MVMGGLWISL
AEFTDLEGLG TTLLTSAGIA GVVIGIAAQP TLGNIIAGFQ VAVTQPVRIG DTIMVDDIWC
EVEDLRYTYA VLKTWDDRRL IVPMKYFVTE VLENWSHTNT QQSSAIYLYV DYGADIDAIS
DKFFELVRAH ELYNVEVEPD FRVIDATKDG ITLRGKVSSD GPLNAWNLEC DIRQQMLAYL
NQQHHMHLPT DRITLTPRPL RHGSDNR
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