| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_1200 |
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| Symbol | |
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| ID | 5205588 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | + |
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| Start bp | 1468484 |
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| End bp | 1469737 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640599420 |
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| Product | putative AcnD-accessory protein PrpF |
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| Protein accession | YP_001280099 |
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| Protein GI | 148653006 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2828] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR02334] probable AcnD-accessory protein PrpF |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCAAT CTAATACACC TTTTGCCCCC CAAATTTCAG TACCTGCCAC CTATATGCGT
GGCGGCACCT CCAAAGGCAC GTTTTTTAAA TTAAGTGATT TGCCTGAGCG TTGCCAACAA
CCTGGCGAGG CTCGCGATAA CTTTTTAATG CGCGTCATTG GCAGCCCCGA TCCTTATGGC
AAGCAAATCG ATGGCTTGGG TAATGGGTCA TCTAGTACCT CAAAGACGGT TATTCTCTCT
AAACCTGATC AAGCCAAGTC TGAAAAAGAT AGCCACGATG TGAATTACCT GTTTGGGCAA
GTGAATATTG CCAAGCCCAT GATTGATTGG GGGGGTAATT GTGGTAATTT AACCGCTGCA
GTGGGCGCTT GTGCCATCAA TATGGGTCTG GTCGATGCTG ATAAAGTAGC TGCTAGTGCC
AAGAGCGGTA TTTGTGAAGT GCGTATTTGG CAGCAGAATA TTAGCAAAAC TATCATTGCC
CATGTGCCGG TCTACACTGA TGAGCAAGGA CAAGTGCAGG TACAAGAAAC CGGCGATTTT
GAATTAGATG GGGTTACCTT CCCTGCCGCA GAGGTAAAAA TTGAATTTAT TGATCCGGTT
GACGCGTCAA GCGCTATGTT CCCAACAGGC CATCTGGTTG ACGACTTTGA TGTCTCCGGG
TGCGGACTGG ATAAAGACTA TGTTCAAGCG ACCTTTATCA ATGCCGGCAT CCCCACCATA
TTTATGAAAG CTGAGGACTT AGGCTTTAAT GGTACTGAGC TTCAGTCTGA TATTAATGGC
AATCAAGAGC TGCTTGATAA GCTTGAGACT ATCCGCGCCA AAGGCGGTGT GGCTATGGGC
TTATTTCAGG ATGTAAGTGA CGCACAAAAA AGCCAGCATA TCCCTAAGAT TGCTTGGGTG
GCACCTGCTC AGTCTTACAC TGCCTCAAGT GGTAAGGTGG TCGATAAAGA CGACATTGAC
TTGGTGGTAC GTGCCATGAG TATGGGGCAG CTGCACCATG CGATGATGGG TACAGCGGCG
GTGGCCATTG CCGCTGCTGC TACCACGCAA GGTACATTGG TTAACCAATC AGCTGGCAAT
GGCTCAGCAA CACAGCTGTC TGAAGTACGC TTTGGTCATC CCTCTGGTAC ACTGCTTGTG
GGCGGTAAAA CTGAGCTGGT AGATGGGCGC TGGCAAGCCA AAAAAGTGTC TATGAGCCGC
TCTGCTCGCC GAATTATGGT CGGGCAAGTG TTTGTGCCTG GTGACTGCTT TTAG
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| Protein sequence | MTQSNTPFAP QISVPATYMR GGTSKGTFFK LSDLPERCQQ PGEARDNFLM RVIGSPDPYG
KQIDGLGNGS SSTSKTVILS KPDQAKSEKD SHDVNYLFGQ VNIAKPMIDW GGNCGNLTAA
VGACAINMGL VDADKVAASA KSGICEVRIW QQNISKTIIA HVPVYTDEQG QVQVQETGDF
ELDGVTFPAA EVKIEFIDPV DASSAMFPTG HLVDDFDVSG CGLDKDYVQA TFINAGIPTI
FMKAEDLGFN GTELQSDING NQELLDKLET IRAKGGVAMG LFQDVSDAQK SQHIPKIAWV
APAQSYTASS GKVVDKDDID LVVRAMSMGQ LHHAMMGTAA VAIAAAATTQ GTLVNQSAGN
GSATQLSEVR FGHPSGTLLV GGKTELVDGR WQAKKVSMSR SARRIMVGQV FVPGDCF
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