Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_1137 |
Symbol | |
ID | 5206918 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | - |
Start bp | 1392552 |
End bp | 1393475 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640599357 |
Product | UspA domain-containing protein |
Protein accession | YP_001280036 |
Protein GI | 148652943 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGATACGG CCATCACCCC CGAGCCTGAT ACAAGCTCTA CACCAGCCCC TCATAAGCCT GCCATATTGG CCTGTATCGA TGGCTCGAGC GTCACAGAGT CGGTCTGTGA CTACGCCGCT TGGTATGCCC GAGAGCTTAA GCTGCCTATT AGCCTGCTGC ATGTGATTGA TGTGCCCAAA AGCTATCGTC ATGATTTAAG CGGCTCTATT GGCATGGATA GCCGTAATAC CTTGCTACAA CAGCTTACCC TCCTTGATGA ACAAAGCGCG CGCGTGGCCA ACCAGCACGG TGAGGCGCTA CTACAAGATG CCAAAGCCCA TATCTTAATC AATCTCCCCC AAGCCAATGT CTACCGCTAT CTGCGCCGTA GTAAGCTGCT TGCCGCCATT CAACACTTCA TTGATGACAG CAAAATGATC ATCTTAGGAC GCCGTGGGCG CGATCATCAA GGCGATCACA TGACCATAGG CAGCCAGATT GAGAGCGTGG TACGCGCCGT GGACTGCCCG ATATTGATCT GCTCAGATGG CTTTATTACC CCCGACTCTT ATATGATACC TTTCGATGGC AGCGAGACGG CAAAAAAAGC CGTACAAAAA GTATGCGACA ATAAAATTGC CAAAAATCTT ACCGGCCACA TTGTCATGGT CGATAATAAG AACAGCGTGC ACGAAAGCGC GTTGTATAAA GCACAAAAAC AGCTTAGCGA TGCCGGCTTC GAGGTCACAG CCCATCTAAT CAGCAGTGAA AAATATGGCG AGGGTGATGT GGTCTCAGCC CTCACAGCCT TTCGTAACCA GCACAACATC AGCATGTTCG TTATCGGTGC CTATGGCCAT GCCAAATGGC GGCGCTTCTT CGTCGGTAGC ACCACCACCA AGCTTTTGAC GAAGACTACA GCGCCTGTGA TGTTGCTGCG CTAA
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Protein sequence | MDTAITPEPD TSSTPAPHKP AILACIDGSS VTESVCDYAA WYARELKLPI SLLHVIDVPK SYRHDLSGSI GMDSRNTLLQ QLTLLDEQSA RVANQHGEAL LQDAKAHILI NLPQANVYRY LRRSKLLAAI QHFIDDSKMI ILGRRGRDHQ GDHMTIGSQI ESVVRAVDCP ILICSDGFIT PDSYMIPFDG SETAKKAVQK VCDNKIAKNL TGHIVMVDNK NSVHESALYK AQKQLSDAGF EVTAHLISSE KYGEGDVVSA LTAFRNQHNI SMFVIGAYGH AKWRRFFVGS TTTKLLTKTT APVMLLR
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