Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_0929 |
Symbol | |
ID | 5206238 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | + |
Start bp | 1111785 |
End bp | 1112888 |
Gene Length | 1104 bp |
Protein Length | 367 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640599148 |
Product | chorismate synthase |
Protein accession | YP_001279829 |
Protein GI | 148652736 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0082] Chorismate synthase |
TIGRFAM ID | [TIGR00033] chorismate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000000251856 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGGAA ATAGTATTGG ACAAGCATTT AAGGTAACCA CGTGCGGTGA GTCACACGGG GCAGGACTGA TGGCCATCGT TGATGGGGTA CCGTCTGGAT TGCCATTAAC CAGTGAGGAC TTGCAGTTAG ACTTAGATCG CCGCAAACCC GGCACCTCTA AATTTGCCAC CCAGCGCCGT GAGCCTGATG AGGTAGAGAT TATCTCGGGT GTGTTTGAGG GTAAAACCAC GGGCACCTCT ATTGGTCTAT TGATTCGCAA TACCAACCAA AAATCAAAAG ACTATAGCGA TATCAAGGAT ACCTTCCGCC CCGGCCATGC CGATTATACT TATAGTATGA AATATGGCTT TCGTGACTAT CGCGGCGGCG GTCGCTCCTC AGCGCGTGAG ACAGCGATGC GGGTAGCGGC AGGTGCCATT GCCAAGAAGT ACCTAAAGCA GCGCTTAGGT ATCGAAATTC ATGGTCACGT GGTGTTGATG GGCAATGAGG CGGCCGCTGT AACAGACCCG AATCAGATTG ATTGGCAGTT TGTGAACAGT AACCCGTTTT TTTGTGCAGA CCCTGACGCT CTGCCTCGCT TTGAGGCGTT GATTGAACGC CTGCGCAAAG AAGGCACCAG CTGCGGTGCG AAACTTGAAG TGATTGCTTC AGGCGTGCCT GTGGGTCTGG GTGAGCCGGT ATTTGATCGC TTAGATGCCG ATATTGCCCA TGCCATGATG AGCATTAATG CGGTAAAAGG CGTGGAGATT GGTGATGGCA TGCGTGTGGC TGAGCAGTTT GGTCATATTG CCCGCGATGA GTTAACGCCC GATGGCTTTA CCGCCAATCA TTCAGGCGGT ATCTTAGGGG GCATCTCATC AGGCCAGGAT ATTAAAGTGA GTATTGCTTT AAAGCCCACA TCCAGTATCA CCACCCCAGG TAAGAGTATT GACCAGCAAG GTCAGCCAGT GGATATGCTT ACCAAAGGTC GTCATGACCC CTGTGTTGGC GTAAGGGCCA CGCCCATTGC TGAAGCGATG CTGGCCATTG TGCTGCTCGA TCATTATTTG CGTCATCGAG GCCAAAATGC TGATGTCACC CAACCGGTGG CTCCTATTGC TTAA
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Protein sequence | MAGNSIGQAF KVTTCGESHG AGLMAIVDGV PSGLPLTSED LQLDLDRRKP GTSKFATQRR EPDEVEIISG VFEGKTTGTS IGLLIRNTNQ KSKDYSDIKD TFRPGHADYT YSMKYGFRDY RGGGRSSARE TAMRVAAGAI AKKYLKQRLG IEIHGHVVLM GNEAAAVTDP NQIDWQFVNS NPFFCADPDA LPRFEALIER LRKEGTSCGA KLEVIASGVP VGLGEPVFDR LDADIAHAMM SINAVKGVEI GDGMRVAEQF GHIARDELTP DGFTANHSGG ILGGISSGQD IKVSIALKPT SSITTPGKSI DQQGQPVDML TKGRHDPCVG VRATPIAEAM LAIVLLDHYL RHRGQNADVT QPVAPIA
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