| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_0601 |
|---|
| Symbol | |
|---|
| ID | 5206624 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter sp. PRwf-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009524 |
|---|
| Strand | - |
|---|
| Start bp | 723588 |
|---|
| End bp | 724337 |
|---|
| Gene Length | 750 bp |
|---|
| Protein Length | 249 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640598816 |
|---|
| Product | silent information regulator protein Sir2 |
|---|
| Protein accession | YP_001279506 |
|---|
| Protein GI | 148652413 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0846] NAD-dependent protein deacetylases, SIR2 family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.496175 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGAAG ATTTTAATCA AGCCACTCAT TTGATATCTA AGGCTAACCG CATTTTTTTG
CTGACTGGAG CGGGGATCTC TGCCGAAAGT GGTATTCCAA CCTTCCGTGA TAAACAAACC
GGACTTTGGG AGAATTACCG AGCTGAAGAC TTAGCAAATA TTAATGCCTT TAAAAAAGAC
CCTCAGACAG TATGGTCGTG GTATCAGTGG CGACGCGGTT TGGTACAAGA CAAACAGCCC
AATCCAGCCC ATTATGCCCT AGCTAATCTA CAGCAGTGGG CCACCGATAA CCATAAAGAT
TGCAGCCTTA TTACCCAAAA TGTCGATGAC TTACATGAAC AAGCAGGCAG TCAGGCCATA
CACTTACACG GCCACTTATG GAAAAACAAA TGCAGTCAAT GTGACGCAAG CTTTAGTGAT
GCCATCGACT ATAACGACCT ACAATTATTA AGCTGCCCAA TGTGCGGTGG TCACATTCGC
CCTGATATTG TTTGGTTTGG TGAGATGCTG CCACAAGGGG CTTGGCAGTA TGCCGAAGAG
GCTGCAGTGC ACTGTGATGT GTTTATAAGT ATTGGTACCT CAAGCTTGGT ATATCCCGCT
GCTGGCTTAG CACAGCTGGC CAAGCAGACG GGCGCTAAGG TGATTGAGAT TAACTTAAAT
CCGACCCAAA GCCCATTAGT TGATGTGGTG TTGGCTGGTC AAGCTGGTGA AATTCTGCCA
AGAATTTTGG CAGCTTTAGA AGATAAATGA
|
|---|
| Protein sequence | MTEDFNQATH LISKANRIFL LTGAGISAES GIPTFRDKQT GLWENYRAED LANINAFKKD
PQTVWSWYQW RRGLVQDKQP NPAHYALANL QQWATDNHKD CSLITQNVDD LHEQAGSQAI
HLHGHLWKNK CSQCDASFSD AIDYNDLQLL SCPMCGGHIR PDIVWFGEML PQGAWQYAEE
AAVHCDVFIS IGTSSLVYPA AGLAQLAKQT GAKVIEINLN PTQSPLVDVV LAGQAGEILP
RILAALEDK
|
|---|
| |