Gene PsycPRwf_0311 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_0311 
SymbolhemA 
ID5204520 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp371286 
End bp372641 
Gene Length1356 bp 
Protein Length451 aa 
Translation table11 
GC content49% 
IMG OID640598521 
Productglutamyl-tRNA reductase 
Protein accessionYP_001279216 
Protein GI148652123 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0373] Glutamyl-tRNA reductase 
TIGRFAM ID[TIGR01035] glutamyl-tRNA reductase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000237446 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0249608 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCTTG TTGTCATCGG TGTGAACCAT AAAACTGCCC CCGTCGCCTT GCGTGAACGG 
TTAGCATTTG TGGGCGGCGA CATCCAGGTG GCGCAAGCAC AATTGCAACA AATCACCGCA
GGCAGTTTGA TCATCTCAAC GTGTAACCGT ACTGAGATTT ATGCTTTAGC GCCCAGCACC
CAGTTACTTG CCAATTCTGA TGCTGCCTTG AGTAAGCAAA GCGATTTGTC GCTGGCTGAT
GAGCCTGTGA GCACCGTTGA TTTAACGGAG CAACTGATCA CGTGGCTGGC AGACTTTAAG
CAAGTACCTC TTGAAGAGAC CCGCCCTTAT TTATATGACT ATGTCGATGG TCAAGCGCTC
ACCCATATGC TGCGCGTAGC AGCCGGTCTG GACTCTATGA TTTTAGGGGA GCCACAAATC
TTCGGTCAGA TCAAACGATC GGTCAACCAG GCCAAAGAAC AAGGTTTTTT GACCAATCAG
CTAAACTGGG TAGTGGAGCA AATATTCGCT GCGGCAAAAA GAGTGCGAAA TGAGACGGAT
GTGGGTACTC AGGCTATCTC CTTGGGCTAC GCGGCCTCTA AGCTTGTCAC CCAAATTTTT
GATCGTCCGG AAGAAACCAC CTTTTTATTG ATTGCCGCAG GTGAAATGAA CCGCTTGGTG
GCACAGAATA TCGCTGGGCT TGGGGTTAAA CGTATCTTAA TCTGTAACCG TACGCCGGAG
CGTGCCAATC TTCTGGCGCA AGAGCTTGCG CACTTGGGTA TACAGATTGA AGTGCACCCG
CTCACAGAGC TGGACTCTTT GTTGTATCAA GCCGATATCG TGAGCAGCTG TAGCGGTAGT
ATGGACATGC TCATTGACAA GGCCATGACT CGCCGCGCAT TAAAAAAACG CCGCTATAAA
CCCATGCTCA TGGTAGATTT AGCGGTGCCT AGAGACATCG ACTCAAGCGT AGGTAAGCTT
GATGATGTGT ACTTGTATTC TATTGATGAC TTGCAACATG TGATTGCCGG CAACCTAGAG
AAGCGTCGTC AGGCGGCGGT AGAGGCAGAG CTTTTGGTTA GTCACTTGGT GGTTGAGATT
GAGCGCCGTT TCCAGGTACG CAAAGTAGGT CAAGATATCC ATGATTACCG TGCCCTTGCT
GCACAAAAGG CCGAAGCTGT ATTAAATGAA GCATTGCATG AGCTGAGAAC CTCAGAGGCG
ACTGCAGAGG AGGTCATGAC AGAGTTGACC CGCCGTCTTA CTCAGACGTT AGTGCATGCG
CCATCTTCTT TAATGCGCCG AGCTGCTCGT GACGGCAATA ACGAAGCGAT TGATTTGATC
ATTCTGGGTC TGAAAGATGC TTATCGCAAA AAGTAA
 
Protein sequence
MNLVVIGVNH KTAPVALRER LAFVGGDIQV AQAQLQQITA GSLIISTCNR TEIYALAPST 
QLLANSDAAL SKQSDLSLAD EPVSTVDLTE QLITWLADFK QVPLEETRPY LYDYVDGQAL
THMLRVAAGL DSMILGEPQI FGQIKRSVNQ AKEQGFLTNQ LNWVVEQIFA AAKRVRNETD
VGTQAISLGY AASKLVTQIF DRPEETTFLL IAAGEMNRLV AQNIAGLGVK RILICNRTPE
RANLLAQELA HLGIQIEVHP LTELDSLLYQ ADIVSSCSGS MDMLIDKAMT RRALKKRRYK
PMLMVDLAVP RDIDSSVGKL DDVYLYSIDD LQHVIAGNLE KRRQAAVEAE LLVSHLVVEI
ERRFQVRKVG QDIHDYRALA AQKAEAVLNE ALHELRTSEA TAEEVMTELT RRLTQTLVHA
PSSLMRRAAR DGNNEAIDLI ILGLKDAYRK K