Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_5215 |
Symbol | |
ID | 5190983 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 5857832 |
End bp | 5858806 |
Gene Length | 975 bp |
Protein Length | 324 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640589698 |
Product | TonB-system energizer ExbB type-1 |
Protein accession | YP_001270517 |
Protein GI | 148550415 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0811] Biopolymer transport proteins |
TIGRFAM ID | [TIGR02797] tonB-system energizer ExbB |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.332421 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACGTA CTCAACCTTC CGCTTCGCCA ACCCCGTCGC GCGCCTGGCG CGCCATCGCC GCGCTGACAC TCAGCCTGGT GCTGGCCCCG GTGGCCATGG CCGATGAGCC AACCACCAAC AGCGCCACAC CTGCCGCTGC TACTGCCCCG GCCGCACCCG CTGCTGCCCC GGTCGATGCG CCGGCGCCTG GTGCCACTGC CACCAACCCG GCAGATACAA CGGCCGCAGC AGACCCAAGC GTTCAAGCCC TGGTCGAAGA CACCTCGCTG GGCATGGCCC ATGACCTGTC CCCATGGGGC ATGTACAAGA ACGCCGACAT CGTGGTGAAG ATCGTCATGA TCGGCCTGGC CATCGCCTCC ATCATCACCT GGACCATCTG GATTGCCAAA GGCTTCGAGC TGATGGGCGC CAAGCGCCGC CTGCGGGGTG AAATCGCCCA GCTGAAGAAG TCCACCACCC TGAAGGAAGC CAGCGAGGTT TCCAACAAGG AAGGCACCCT GGCCCATACC CTGGTCCACG ATGCCCTCGA AGAGATGCGC CTTTCGACTA ACGCCCGCGA AAAAGAAGGC ATCAAGGAGC GCGTCAGCTT CCGTCTGGAG CGCCTGGTGC ATGCCAGCGG CCGTACCATG AGCAGCGGCA CCGGCGTCCT CGCAACCATC GGCTCCACTG CGCCGTTCGT TGGCCTGTTC GGTACCGTAT GGGGCATCAT GAACAGCTTC ATCGGCATCG CCAAGACCCA GACCACCAAC CTGGCCGTCG TTGCCCCAGG TATCGCCGAA GCGCTGCTGG CCACTGCTCT GGGCCTGGTC GCGGCAATCC CGGCCGTGGT CATCTACAAC GTCTTCGCCC GCTCCATTGC CGGTTACAAG GCGCAGGTGT CCGATGCCTC CGCCCAGGTA CTGCTGCTGG TAAGCCGTGA TCTGGACCAC CAGGGTAGCG AGCGCGCCGC CCCGCACATG GTGAAAGTGG GGTAA
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Protein sequence | MTRTQPSASP TPSRAWRAIA ALTLSLVLAP VAMADEPTTN SATPAAATAP AAPAAAPVDA PAPGATATNP ADTTAAADPS VQALVEDTSL GMAHDLSPWG MYKNADIVVK IVMIGLAIAS IITWTIWIAK GFELMGAKRR LRGEIAQLKK STTLKEASEV SNKEGTLAHT LVHDALEEMR LSTNAREKEG IKERVSFRLE RLVHASGRTM SSGTGVLATI GSTAPFVGLF GTVWGIMNSF IGIAKTQTTN LAVVAPGIAE ALLATALGLV AAIPAVVIYN VFARSIAGYK AQVSDASAQV LLLVSRDLDH QGSERAAPHM VKVG
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