Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_5015 |
Symbol | |
ID | 5195008 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 5638286 |
End bp | 5642776 |
Gene Length | 4491 bp |
Protein Length | 1496 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640589500 |
Product | AAA ATPase |
Protein accession | YP_001270319 |
Protein GI | 148550217 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.940006 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATTACA CACGCATCAG GGGCATGGAA TCAGGACAGC GCCTCGCCTT CGAAGAACTC ATCTGCCAAC TAGCTCGACG AGAAAGGCCA GCCGCTGACG CGGAATTCAG GCGAATAGAA GGTGCCGGCG GGGACGGGGG AATCGAGGCA TATTGGCTGC TCGATGACGG GAGCGAAATC GGATATCAAG CCAAATACTA TACAAAGTCT CGAGAAATAA ATTGGGCAAA CATCGATGAC TCTGTAGAGA CCGCTCTAAA GGCGCACCCA GAGCTGACCA AGTACGTCAT TGCGCTCCCA TGTGATCTTA CTGACAAAAC CGGAAAGCAA GGTCGTGGCA ATACTGGCTG GCAGTCTTGG AACGCACGAA AAGCTAAATG GACTGAACTC GTTGCGCCAG GTAAAAGCAT AGAATTTATT GTTTGGACAG CCTCGGATAT CACTGATCGG CTAGCTCATC CATCAGCAGA AGGCCTCCGC CGCTTCTGGT TTGGAGATTT TGAGTTCTCG GCCCGTTGGT TCTCTGACCA CATCGCTTTG GCCATTAAGT CGCTGGATGA AAGATATCAC CCTGAAGACC ACGTTGAAGT CGGGATAGAG CGGGTATTTC GAATAGCGTT ACGCGACCCC AGCATCATCA CAGAGATCCA AGAACAGATC GCCAAAATTT ACGCCGCAGC TCAACTCAAA TCCGTTGAAA AAACCTTAGG TGGCCAGGTC GACCAAATAG AAAAAATTGA GCAGGGAATT GGTTCGCTCG AAAGTCTCTC TCAGCAATTC ACAACCGACG CCTGGAGAAA CTGGCCTCTA AGGGAAGTCA TACAAAGCGT TGAGAGTATC TCGGATAACG TCCATGACTT AGAACGAGCC GTGTGGAAAT TGCGTGAGTC GATGCCGGAG CAGCCAAAGT CTGGATTTTC TGCGCTGGAT TCAGCCGACC ACACACTTAG AAAGCTTAGT GATGTAGCTT ACATCTTCAG ATCTTATATA CAAAAGCGCC ATTTCTCCGC CGAATACCAT CGCAGCATTC TCATATATGG AAAAGCTGGA ACAGGAAAAT CACATCTTTT AGGGAGCATC GCCGAAAGGG CCATAGCAGA AGGCCGGCCT GTCTTCTTCA TCCTTGGCCA GCACTTAACT GCAGAAAATA TTTGGACTCA GATATCCAGG CGCCTCGGTA TAGATAAGGT CAATCCCGAT GCTTTATTGC AGGCTCTGAG CGCGGCAGCC GATGCCAGCG GTAAGCGCGG TCTCATCCTA GTAGATGCGG TCAATGAAGG GGCAGGGCTG TCACTTTGGC GTAATGAGCT AGCAGAATTC ATCGCTAGGG TTGAGCGTCA CGCCAATCTC CTACTCGTGT TCAGTTGCAG AACCGAATAC AAGCCTTATG TCATCCCTAA ATCGTTAGAG GAGACGATTC CATCGTTTCG AATTCAAGGT TTCGAAACTA AGGAAGAGCA ATCACGCGCA GCGAGGGTCT ACTTGGGTGG TCGTGGGATC TCCCAACCTA ATACCCCATG GCTGGCAGCA GAATTCGTCA ATCCACTCTT CCTGCGCAGC GCTTGTGTCG CTCTGAAGCT AGAAGGCCTC AAACATTTCC CCAAGGGACT TGTGGGTACG AAGCAGGTAT TCTCCTTCTA CACAAAAAGC ATTGCCCGGA ACATGGGTGT AGGAAGAGAT GGCAGCGACG AACTGGTCAC ACCCACAAAC CAGGCACTCG CTGCGATTGC TGCTTATATG GCTACCCATA GGCGAGACTT CGTACCTCAC ATTGATGCAA TTCGAATCGT TGGAGAAAAG TTCCACGCAT ATCCTACTCC TCCTGGGATA ACTTGGTTCG AGGCCCTTCA GAGAAACGGA CTTTTTAGAC TAGACCCTAA TCCCAGAGGC TGGGATGCTG ATCCGTTCGC AGTCCCGGAT GATATAGTTC GCTTTAGCTT CCAACGCCTT CAAGACTATT TAATGGCTTC CGGCCTCCTG AAGGAAGTTG ATGACCCATC GGAAGCCTTG CGAGCTGGTA CACTTCAATT TATCCACGAT GGGGAAAGTA TTCACGGCGA ATGGGCCGGG CTTACAGACG CACTTTCTGT GCAGCTGCCT GAGCTATTTG ATCAAGAATT ACTTGATCTC CTACCTGGAG ACATCGGAGT TTGGGCTGAT GATTACGCCG TTGGCAACGC ATTCATCGAA AGCCTAAGAT GGAGGAATAA CGACTCATTC ACTGAACGCA CCCTGGAAAT ATTCGAGGCG TTCGTTAAGG CCGAAGAGGA ACACTTCGAT ATAGTTGTCC AGGTAAGTGC GAATGTGGGG CACCCGTGGA ATGCCAAGGT GCTTCACCAA AAACTGATCA ACCTAAGCAT GGCAAATCGG GATGCTCACT GGACTGTACT TATTAACGAG CTTCCTTTAG GCGAAGGCGA TACCGCACGG AGACTGATCG AGTGGAGCGC CCTTGAGCAA AATGAACGTA CTGATCCGGA AGTTCAGCAC CTTTGCGCGA TCACTCTCAC GTGGTTCCTC GCGAGTTCGA ACCGCGAGCT ACGTGATAAA TCAACCAAGG CGCTCACGTC CTTGATGATT CACAACCTAT CCCTCTATGC GAAGCTTTCT CAAGCCTTCT ACGAAGTCGA CGACCTCTAT GTGCTAGAGC GCCTCCACAC AGCCGCTTAC GGCGCATGCT GCATTAGACA TGACGAGAAG ATTCTACGTG AATTTGCTGG CGTTGCTTAC GAGACAGTAT TCAATCGTGA AGATGTTCCC GCATCCATTC TGCTCAGAGA TGCTGCTTTC GGAATCATTG AGCTTGCACA CGCCAGAGGC CACCTGCCCA GCACTGTAGA CATGCTGCAA TCAAGGCCGC CCTATACCTC CAAGGCAATT CGCCTGGCAG TTACTGAGGA AGCGCTGAAA AAAGCAGCCA ATCGAGCGGG CGACTCCCAA ATACAAGACT CTTGCTCTCA GTGGGGAGGT GATTTCGGAT GCTACGAGAT ACGCCCGCGC ATTAGCTCAT TTGCGAATGT GTCCCTGAGC AAGCCTGAAC CTCTCTCTCC GACCGAACGG TATGAAGTCT TCGAGCAAGA AGTCATAGAT CATTGCCCTA TACGTGTTGA GCTCCTGGAG CTGATGCGTA CCTTCGCGCC CAATCGCTTC CGAGATCTCG CCATGCGTCG GAAAGGTAAA GCGGCAAAAG ACTACTCAGA ACACTTCAGG GACTGCGAAA AGCTGCTTCT GATGAGATTG AGCACAAAGG AGAAAGCCCG TTATCGCAAG GAGTACAAAC CACGTTTCAA CAATGAAGAT GGCCGGCCAG ACCCTGTGCC GCATATCGAC ATAGCCGCTG CCCAACTCTG GGTTGCTAAA CGAGCCTACG CTCTTGGGTG GACGAAAAAG CTCTTCCCCA ACGACCGAAG CAGGCGGCAT GACTACAGCC GAGACCGGCC TCTCGTCGAA CGGATTGGCA AGAAGTACCA GTGGCTGGCT CTGGATGAGC TCCTATGCAG CCTTACTGAC AATAAATGGA TGGCGGAGCG AGCCCTCCAC GGGTCGCGCC AGTATGCAGG GCCACTCGAC ATCGGCTTCC ACAGAGACAT TGACCCCACG ATCCTGCTTC CTGTCAACCT TCCAGCCAAG CCCGGAGACT CTATTGCGAG ATGCGAGATC AGCATGCGAG AGACCACCGA GGCGGAGCTT GGCAAGTGGC CGTTTGAGGA GAATCCCGCG ACAAACATGC CTAACCTTTT GGTCAGGAAG GATTTGGCTG GCCAGGACTG GGTGGTTCTG CACGAGCATC GCTCGGAGAC AGAACGTTAT AAGGACAAAT CAGACCGCGA GCATGGCCAA AGAAAGCAGG AGTGGCGTTT TCTGTTGCCC GTAATTGTCA GGCACGAAGA CGAAGAAGCG CTCATAAAGT ACATCCGCCT GCAGAAAGAG ATCCGGGTGG ACAACTGGTC GACGCGCAAC TCAACGGACA ATGGCTATCT TCTGGAGGCC CCTTGGCGCT CGACTTGGGA TCAGGAGCAG TGGTCAATCA TGGATTTTTA CAACATCGGT GAGGTCGAGG TTGCTTATCC TTGCTTCCGC TACCACTGGG AGTCACATCT GGACGCCTCG CTGACGGACG GCGCCCATGC CCTGATGCCC GCGCCCTGGT TAGCCAAACG CCTCGGTCTG AAACCAGATC ACGCAAACCC GAATATTTAC GTTGGCGCTT CCGGCACTCC TCTCTTCGTC AGTGGGCAGA GCAGAGATGA CGGCTCACAC GCCTTCATTG ACCAAGATCT GTTCAACACC TTCCTTGAGG AAGATGGTCT CTCTTGCATA TGGGTGTTCG TCACCGAGCG AGGAGCTTGG CCTGATGGAG GTAACCACCA TGCGTCTTGG CGCCGCTCTG AAGGCATCGT CTGGCACAGC AAGGGGAAAC CCCAGATCCA TCACTGGAAA CGGGACACAG ACAAGAGCGA GACAGAGGAG CCGCTTGATT TTGAATCGTG A
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Protein sequence | MDYTRIRGME SGQRLAFEEL ICQLARRERP AADAEFRRIE GAGGDGGIEA YWLLDDGSEI GYQAKYYTKS REINWANIDD SVETALKAHP ELTKYVIALP CDLTDKTGKQ GRGNTGWQSW NARKAKWTEL VAPGKSIEFI VWTASDITDR LAHPSAEGLR RFWFGDFEFS ARWFSDHIAL AIKSLDERYH PEDHVEVGIE RVFRIALRDP SIITEIQEQI AKIYAAAQLK SVEKTLGGQV DQIEKIEQGI GSLESLSQQF TTDAWRNWPL REVIQSVESI SDNVHDLERA VWKLRESMPE QPKSGFSALD SADHTLRKLS DVAYIFRSYI QKRHFSAEYH RSILIYGKAG TGKSHLLGSI AERAIAEGRP VFFILGQHLT AENIWTQISR RLGIDKVNPD ALLQALSAAA DASGKRGLIL VDAVNEGAGL SLWRNELAEF IARVERHANL LLVFSCRTEY KPYVIPKSLE ETIPSFRIQG FETKEEQSRA ARVYLGGRGI SQPNTPWLAA EFVNPLFLRS ACVALKLEGL KHFPKGLVGT KQVFSFYTKS IARNMGVGRD GSDELVTPTN QALAAIAAYM ATHRRDFVPH IDAIRIVGEK FHAYPTPPGI TWFEALQRNG LFRLDPNPRG WDADPFAVPD DIVRFSFQRL QDYLMASGLL KEVDDPSEAL RAGTLQFIHD GESIHGEWAG LTDALSVQLP ELFDQELLDL LPGDIGVWAD DYAVGNAFIE SLRWRNNDSF TERTLEIFEA FVKAEEEHFD IVVQVSANVG HPWNAKVLHQ KLINLSMANR DAHWTVLINE LPLGEGDTAR RLIEWSALEQ NERTDPEVQH LCAITLTWFL ASSNRELRDK STKALTSLMI HNLSLYAKLS QAFYEVDDLY VLERLHTAAY GACCIRHDEK ILREFAGVAY ETVFNREDVP ASILLRDAAF GIIELAHARG HLPSTVDMLQ SRPPYTSKAI RLAVTEEALK KAANRAGDSQ IQDSCSQWGG DFGCYEIRPR ISSFANVSLS KPEPLSPTER YEVFEQEVID HCPIRVELLE LMRTFAPNRF RDLAMRRKGK AAKDYSEHFR DCEKLLLMRL STKEKARYRK EYKPRFNNED GRPDPVPHID IAAAQLWVAK RAYALGWTKK LFPNDRSRRH DYSRDRPLVE RIGKKYQWLA LDELLCSLTD NKWMAERALH GSRQYAGPLD IGFHRDIDPT ILLPVNLPAK PGDSIARCEI SMRETTEAEL GKWPFEENPA TNMPNLLVRK DLAGQDWVVL HEHRSETERY KDKSDREHGQ RKQEWRFLLP VIVRHEDEEA LIKYIRLQKE IRVDNWSTRN STDNGYLLEA PWRSTWDQEQ WSIMDFYNIG EVEVAYPCFR YHWESHLDAS LTDGAHALMP APWLAKRLGL KPDHANPNIY VGASGTPLFV SGQSRDDGSH AFIDQDLFNT FLEEDGLSCI WVFVTERGAW PDGGNHHASW RRSEGIVWHS KGKPQIHHWK RDTDKSETEE PLDFES
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