Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_4752 |
Symbol | |
ID | 5192534 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 5321220 |
End bp | 5322374 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640589235 |
Product | hypothetical protein |
Protein accession | YP_001270056 |
Protein GI | 148549954 |
COG category | [S] Function unknown |
COG ID | [COG1944] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0130582 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCACCG AACGCGAGCT GAACATAGAA GAGGCCTACA ACCGCTTGAC AAGAATGCAT CATCACTTAG GGCTTCAATC GAAAACAGAA CTATCAAAAA AGAATAGCCT GGTCGCCACA TGCCACTTAT ACGACAGCGC CTACAAAGAA GTTTCTTGCG GAGCAGGAAA AGGGGAGCAT TGCGAACTAG GAGCCCTTGC CGAGAGCCTA GAGCATTACT TCGTCGACAA GAGCACTCCA CCACTCATCG AAAGCGACCA AATTTTGCAA TCGATAGCCC CATTTGACGA TTGGCTTCTA AAATCCATTC CCCCGGATTG CCGAATACCT TATTTCAGTC TTCAGGCATT GAACAGCTAC GACGAAATAG CTATTCCCGC GATATTGATA GCACCTTCCT CCAGAAACAT TGATGAAATC GAAAAAACTG CAGCGGGCTT TCTTTCCAAA TATTCGACCA ACTCTGGTAC AGCACTTGGC TGCACGGAGA ACGAGGCTCT GCTCCACGCC ATCAATGAAG CTATCGAACG TCACGCACTT TCTATGTACT ACCTATCACT TTGTGGCCTG ACTTCCCCAC CCAAACTTTA CCAACCTTCG ATTTCTTTTC TGGAAGAAAC ATTTGCCCAT GATACCGAGC TTCTCCGTCG AGCCAAAAAA CTAGAAATAT ACTTGACGCA CGACTTCTAC GAAGTTTCAT TTTGCATTGC TGTTTCTCGT AGTAAAAAAG AAGGCTCACT CAGCAGCATT GGCTCCGGCA GCTCCATCAA CCCCTCCATT GCAATGTACC GCGCCGTAAC GGAACAGATT CAGTGCGAGC AGCTTTCTGG GGCCACAGAA AAACAAGAGG ATCTCTCTGC TGAAAAAATG CTTACTCATT CAACCCGCCT TTCAGCACTT ATACACCCAT GCCCCACATA TGCTGTACCC GCTTTTCACC CTCCGCATAC CGACCTCAGC GTGCGCGGGC AAGTCAAGCG AACACTGATC AACTTGGAAA AACATAATAA GGTCGCATTC TATCGCACAC TTTATGAGCA CCCGAATCTC GCTACGGTTG TTCAGGTGTT CATACCCGGA CTTGAACGCT TCCACCTGAT CAGATCAGGT ATTCCAGTCG CGCCACAGAG TGCACTCAAA GGCATAAGGC AATGA
|
Protein sequence | MITERELNIE EAYNRLTRMH HHLGLQSKTE LSKKNSLVAT CHLYDSAYKE VSCGAGKGEH CELGALAESL EHYFVDKSTP PLIESDQILQ SIAPFDDWLL KSIPPDCRIP YFSLQALNSY DEIAIPAILI APSSRNIDEI EKTAAGFLSK YSTNSGTALG CTENEALLHA INEAIERHAL SMYYLSLCGL TSPPKLYQPS ISFLEETFAH DTELLRRAKK LEIYLTHDFY EVSFCIAVSR SKKEGSLSSI GSGSSINPSI AMYRAVTEQI QCEQLSGATE KQEDLSAEKM LTHSTRLSAL IHPCPTYAVP AFHPPHTDLS VRGQVKRTLI NLEKHNKVAF YRTLYEHPNL ATVVQVFIPG LERFHLIRSG IPVAPQSALK GIRQ
|
| |