Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_4613 |
Symbol | |
ID | 5195339 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 5165622 |
End bp | 5166455 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640589096 |
Product | hypothetical protein |
Protein accession | YP_001269917 |
Protein GI | 148549815 |
COG category | [V] Defense mechanisms |
COG ID | [COG3440] Predicted restriction endonuclease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0000441366 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCCAAAC TTAATTCATT TGAAATCGCA GCTGCACTCA TCCGTAAGGG CTTTGTTCTG ACCGTAAAAA ATCAACATGC TAACGGGTAT GAGCAACCTG GTTTTAACGG TCGTGTATTC GTCAAAATGA GCAAAACGGG TGCTCCTGTT GCCAAGCAGC CCTTCCTCAT TCATCCAGAA CATGCCACCG CAGGTAAATG GAACTCCATC AAGGTACTTT CCCCTTCGTT GCCAAATACC GGGTATCGAA ACACCAACAT GACGGGTTAT CCCACCGTAG CTGGCTCTGA CAGTAAATTA GCAATTGCAT TGGATATCGC TACAGAGGCC GACCTTCATC AACTCCTTGA TCTACTCGGT TATAAATCCT CTGTTTCTGC CCTCCAGTCC GCGACTCCTA AATCTTCGGT CTCAACAGAG GAATTTCTAA ACGATCCAAA CCTCACCGAC ACCGAACGCG ATGCCCTGAT CAAAGCGCGC ATCGGCCAGA GCAGCTACCG CGACGACCTG CTGGCCTACT GGGGCGGCTG TGCGATTACC GACTGCTGCG TACCGGAGTT GTTGCGGGCC TCGCATATCA AACCCTGGCG TGCTGCCAGC CCTGCCGAGC GGCTTGATCC GTTCAACGGG CTGTTGCTCA CCCCCAATCT TGATCTGGCC TTCGACCGTG GCCTGATCAG CTTTGACGAT CAGGGGCAGA TTCTTCTTGG CGAGGATCTC GACCCCGACA GCGCCCGTGC GCTCAACATC ACCCCTTGTC TGCGCTTGCG CCAGATCAAG CCGCAGCATC GCGACTATCT GGCCTGGCAC CGTGAACACC TTTTCAGGAA GTAA
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Protein sequence | MPKLNSFEIA AALIRKGFVL TVKNQHANGY EQPGFNGRVF VKMSKTGAPV AKQPFLIHPE HATAGKWNSI KVLSPSLPNT GYRNTNMTGY PTVAGSDSKL AIALDIATEA DLHQLLDLLG YKSSVSALQS ATPKSSVSTE EFLNDPNLTD TERDALIKAR IGQSSYRDDL LAYWGGCAIT DCCVPELLRA SHIKPWRAAS PAERLDPFNG LLLTPNLDLA FDRGLISFDD QGQILLGEDL DPDSARALNI TPCLRLRQIK PQHRDYLAWH REHLFRK
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